RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.44
C9orf78-201ENST00000372447 NDUFAF8A1L188 74 aa6.08□□□□□ -1.44
C9orf78-201ENST00000372447 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
C9orf78-201ENST00000372447 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
C9orf78-201ENST00000372447 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
C9orf78-201ENST00000372447 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
C9orf78-201ENST00000372447 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
C9orf78-201ENST00000372447 MDN1Q9NU22 5596 aa5.96□□□□□ -1.46
C9orf78-201ENST00000372447 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
C9orf78-201ENST00000372447 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
C9orf78-201ENST00000372447 NEBP20929 6669 aa5.93□□□□□ -1.46
C9orf78-201ENST00000372447 KRTAP4-2Q9BYR5 136 aa5.91□□□□□ -1.46
C9orf78-201ENST00000372447 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
C9orf78-201ENST00000372447 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
C9orf78-201ENST00000372447 SPRR2EP22531 72 aa5.84□□□□□ -1.47
C9orf78-201ENST00000372447 SPRR2BP35325 72 aa5.84□□□□□ -1.47
C9orf78-201ENST00000372447 SPRR2AP35326 72 aa5.84□□□□□ -1.47
C9orf78-201ENST00000372447 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
C9orf78-201ENST00000372447 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
C9orf78-201ENST00000372447 MT1EP04732 61 aa5.82□□□□□ -1.48
C9orf78-201ENST00000372447 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
C9orf78-201ENST00000372447 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
C9orf78-201ENST00000372447 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
C9orf78-201ENST00000372447 SPRR2DP22532 72 aa5.64□□□□□ -1.51
C9orf78-201ENST00000372447 MT1LQ93083 61 aa5.64□□□□□ -1.51
C9orf78-201ENST00000372447 MT1GP13640 62 aa5.6□□□□□ -1.51
C9orf78-201ENST00000372447 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
C9orf78-201ENST00000372447 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
C9orf78-201ENST00000372447 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
C9orf78-201ENST00000372447 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
C9orf78-201ENST00000372447 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
C9orf78-201ENST00000372447 MT1MQ8N339 61 aa5.51□□□□□ -1.53
C9orf78-201ENST00000372447 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
C9orf78-201ENST00000372447 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
C9orf78-201ENST00000372447 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
C9orf78-201ENST00000372447 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
C9orf78-201ENST00000372447 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
C9orf78-201ENST00000372447 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
C9orf78-201ENST00000372447 INE1O15225 51 aa5.03□□□□□ -1.6
C9orf78-201ENST00000372447 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
C9orf78-201ENST00000372447 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
C9orf78-201ENST00000372447 LCE4AQ5TA78 99 aa5□□□□□ -1.61
C9orf78-201ENST00000372447 MT4P47944 62 aa4.91□□□□□ -1.62
C9orf78-201ENST00000372447 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
C9orf78-201ENST00000372447 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
C9orf78-201ENST00000372447 MT1AP04731 61 aa4.78□□□□□ -1.64
C9orf78-201ENST00000372447 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
C9orf78-201ENST00000372447 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
C9orf78-201ENST00000372447 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
C9orf78-201ENST00000372447 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
C9orf78-201ENST00000372447 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
C9orf78-201ENST00000372447 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
C9orf78-201ENST00000372447 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
C9orf78-201ENST00000372447 MT3P25713 68 aa4.36□□□□□ -1.71
C9orf78-201ENST00000372447 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
C9orf78-201ENST00000372447 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
C9orf78-201ENST00000372447 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
C9orf78-201ENST00000372447 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
C9orf78-201ENST00000372447 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
C9orf78-201ENST00000372447 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
C9orf78-201ENST00000372447 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
C9orf78-201ENST00000372447 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
C9orf78-201ENST00000372447 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
C9orf78-201ENST00000372447 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
C9orf78-201ENST00000372447 PRM1P04553 51 aa3.84□□□□□ -1.79
C9orf78-201ENST00000372447 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
C9orf78-201ENST00000372447 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
C9orf78-201ENST00000372447 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
C9orf78-201ENST00000372447 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
C9orf78-201ENST00000372447 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
C9orf78-201ENST00000372447 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
C9orf78-201ENST00000372447 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
C9orf78-201ENST00000372447 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
C9orf78-201ENST00000372447 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
C9orf78-201ENST00000372447 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
C9orf78-201ENST00000372447 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
C9orf78-201ENST00000372447 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 270.4 ms