RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
KDM4A-201ENST00000372396 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
KDM4A-201ENST00000372396 SPRR2EP22531 72 aa3.35□□□□□ -1.87
KDM4A-201ENST00000372396 SPRR2BP35325 72 aa3.35□□□□□ -1.87
KDM4A-201ENST00000372396 SPRR2AP35326 72 aa3.35□□□□□ -1.87
KDM4A-201ENST00000372396 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
KDM4A-201ENST00000372396 USH2AO75445 5202 aa3.32□□□□□ -1.88
KDM4A-201ENST00000372396 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
KDM4A-201ENST00000372396 MT1MQ8N339 61 aa3.27□□□□□ -1.89
KDM4A-201ENST00000372396 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
KDM4A-201ENST00000372396 SPRR2DP22532 72 aa3.25□□□□□ -1.89
KDM4A-201ENST00000372396 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
KDM4A-201ENST00000372396 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
KDM4A-201ENST00000372396 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
KDM4A-201ENST00000372396 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
KDM4A-201ENST00000372396 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
KDM4A-201ENST00000372396 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
KDM4A-201ENST00000372396 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
KDM4A-201ENST00000372396 PRM1P04553 51 aa3.1□□□□□ -1.91
KDM4A-201ENST00000372396 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
KDM4A-201ENST00000372396 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
KDM4A-201ENST00000372396 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
KDM4A-201ENST00000372396 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
KDM4A-201ENST00000372396 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
KDM4A-201ENST00000372396 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
KDM4A-201ENST00000372396 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
KDM4A-201ENST00000372396 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
KDM4A-201ENST00000372396 MT1AP04731 61 aa2.99□□□□□ -1.93
KDM4A-201ENST00000372396 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
KDM4A-201ENST00000372396 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
KDM4A-201ENST00000372396 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
KDM4A-201ENST00000372396 KMT2DO14686 5537 aa2.95□□□□□ -1.94
KDM4A-201ENST00000372396 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
KDM4A-201ENST00000372396 MT3P25713 68 aa2.89□□□□□ -1.95
KDM4A-201ENST00000372396 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
KDM4A-201ENST00000372396 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
KDM4A-201ENST00000372396 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
KDM4A-201ENST00000372396 MT4P47944 62 aa2.8□□□□□ -1.96
KDM4A-201ENST00000372396 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
KDM4A-201ENST00000372396 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.97
KDM4A-201ENST00000372396 NEBP20929 6669 aa2.77□□□□□ -1.97
KDM4A-201ENST00000372396 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
KDM4A-201ENST00000372396 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
KDM4A-201ENST00000372396 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
KDM4A-201ENST00000372396 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
KDM4A-201ENST00000372396 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
KDM4A-201ENST00000372396 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
KDM4A-201ENST00000372396 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.99
KDM4A-201ENST00000372396 LCE1FQ5T754 118 aa2.54□□□□□ -2
KDM4A-201ENST00000372396 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
KDM4A-201ENST00000372396 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
KDM4A-201ENST00000372396 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
KDM4A-201ENST00000372396 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
KDM4A-201ENST00000372396 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
KDM4A-201ENST00000372396 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
KDM4A-201ENST00000372396 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
KDM4A-201ENST00000372396 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
KDM4A-201ENST00000372396 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
KDM4A-201ENST00000372396 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
KDM4A-201ENST00000372396 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
KDM4A-201ENST00000372396 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
KDM4A-201ENST00000372396 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
KDM4A-201ENST00000372396 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
KDM4A-201ENST00000372396 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
KDM4A-201ENST00000372396 KRTAP4-2Q9BYR5 136 aa1.89□□□□□ -2.11
KDM4A-201ENST00000372396 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
KDM4A-201ENST00000372396 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
KDM4A-201ENST00000372396 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
KDM4A-201ENST00000372396 KRTAP4-12Q9BQ66 201 aa1.82□□□□□ -2.12
KDM4A-201ENST00000372396 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
KDM4A-201ENST00000372396 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
KDM4A-201ENST00000372396 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
KDM4A-201ENST00000372396 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
KDM4A-201ENST00000372396 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
KDM4A-201ENST00000372396 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
KDM4A-201ENST00000372396 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
KDM4A-201ENST00000372396 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms