RNA–Protein interactions for RNA: ENST00000371610.6

PARD6B-201, Transcript of par-6 family cell polarity regulator beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARD6B, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-201ENST00000371610 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
PARD6B-201ENST00000371610 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
PARD6B-201ENST00000371610 MT1LQ93083 61 aa4.29□□□□□ -1.72
PARD6B-201ENST00000371610 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
PARD6B-201ENST00000371610 USH2AO75445 5202 aa4.28□□□□□ -1.72
PARD6B-201ENST00000371610 MT1EP04732 61 aa4.26□□□□□ -1.73
PARD6B-201ENST00000371610 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
PARD6B-201ENST00000371610 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
PARD6B-201ENST00000371610 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
PARD6B-201ENST00000371610 MT3P25713 68 aa4.15□□□□□ -1.74
PARD6B-201ENST00000371610 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
PARD6B-201ENST00000371610 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
PARD6B-201ENST00000371610 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
PARD6B-201ENST00000371610 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PARD6B-201ENST00000371610 MT1MQ8N339 61 aa4.12□□□□□ -1.75
PARD6B-201ENST00000371610 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
PARD6B-201ENST00000371610 MT4P47944 62 aa4.09□□□□□ -1.75
PARD6B-201ENST00000371610 KMT2DO14686 5537 aa4.07□□□□□ -1.76
PARD6B-201ENST00000371610 DSTQ03001 7570 aaKnown RBP4.05□□□□□ -1.76
PARD6B-201ENST00000371610 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
PARD6B-201ENST00000371610 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
PARD6B-201ENST00000371610 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
PARD6B-201ENST00000371610 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
PARD6B-201ENST00000371610 PRM1P04553 51 aa3.88□□□□□ -1.79
PARD6B-201ENST00000371610 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
PARD6B-201ENST00000371610 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
PARD6B-201ENST00000371610 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
PARD6B-201ENST00000371610 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
PARD6B-201ENST00000371610 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
PARD6B-201ENST00000371610 MT1AP04731 61 aa3.77□□□□□ -1.81
PARD6B-201ENST00000371610 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
PARD6B-201ENST00000371610 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
PARD6B-201ENST00000371610 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
PARD6B-201ENST00000371610 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
PARD6B-201ENST00000371610 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
PARD6B-201ENST00000371610 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
PARD6B-201ENST00000371610 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
PARD6B-201ENST00000371610 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
PARD6B-201ENST00000371610 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
PARD6B-201ENST00000371610 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
PARD6B-201ENST00000371610 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
PARD6B-201ENST00000371610 MUC19Q7Z5P9 8384 aa3.56□□□□□ -1.84
PARD6B-201ENST00000371610 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
PARD6B-201ENST00000371610 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
PARD6B-201ENST00000371610 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
PARD6B-201ENST00000371610 NEBP20929 6669 aa3.43□□□□□ -1.86
PARD6B-201ENST00000371610 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
PARD6B-201ENST00000371610 LCE1CQ5T751 118 aa3.21□□□□□ -1.89
PARD6B-201ENST00000371610 LCE1EQ5T753 118 aa3.21□□□□□ -1.89
PARD6B-201ENST00000371610 LCE1FQ5T754 118 aa3.21□□□□□ -1.89
PARD6B-201ENST00000371610 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
PARD6B-201ENST00000371610 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
PARD6B-201ENST00000371610 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
PARD6B-201ENST00000371610 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
PARD6B-201ENST00000371610 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
PARD6B-201ENST00000371610 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
PARD6B-201ENST00000371610 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
PARD6B-201ENST00000371610 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
PARD6B-201ENST00000371610 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
PARD6B-201ENST00000371610 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
PARD6B-201ENST00000371610 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
PARD6B-201ENST00000371610 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
PARD6B-201ENST00000371610 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
PARD6B-201ENST00000371610 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
PARD6B-201ENST00000371610 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PARD6B-201ENST00000371610 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
PARD6B-201ENST00000371610 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
PARD6B-201ENST00000371610 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
PARD6B-201ENST00000371610 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
PARD6B-201ENST00000371610 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
PARD6B-201ENST00000371610 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.09
PARD6B-201ENST00000371610 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.1
PARD6B-201ENST00000371610 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
PARD6B-201ENST00000371610 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.13
PARD6B-201ENST00000371610 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
PARD6B-201ENST00000371610 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
PARD6B-201ENST00000371610 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 188 ms