RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
SNX27-203ENST00000368843 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
SNX27-203ENST00000368843 HERC2O95714 4834 aa5.4□□□□□ -1.55
SNX27-203ENST00000368843 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.55
SNX27-203ENST00000368843 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.56
SNX27-203ENST00000368843 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
SNX27-203ENST00000368843 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
SNX27-203ENST00000368843 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
SNX27-203ENST00000368843 KMT2CQ8NEZ4 4911 aaKnown RBP5.25□□□□□ -1.57
SNX27-203ENST00000368843 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
SNX27-203ENST00000368843 MT1AP04731 61 aa5.14□□□□□ -1.59
SNX27-203ENST00000368843 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
SNX27-203ENST00000368843 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
SNX27-203ENST00000368843 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.6
SNX27-203ENST00000368843 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
SNX27-203ENST00000368843 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
SNX27-203ENST00000368843 KRTAP2-1Q9BYU5 128 aa5.06□□□□□ -1.6
SNX27-203ENST00000368843 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
SNX27-203ENST00000368843 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
SNX27-203ENST00000368843 LCE1CQ5T751 118 aa4.89□□□□□ -1.63
SNX27-203ENST00000368843 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
SNX27-203ENST00000368843 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
SNX27-203ENST00000368843 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
SNX27-203ENST00000368843 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
SNX27-203ENST00000368843 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
SNX27-203ENST00000368843 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.64
SNX27-203ENST00000368843 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SNX27-203ENST00000368843 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
SNX27-203ENST00000368843 EPPK1P58107 5090 aaKnown RBP4.82□□□□□ -1.64
SNX27-203ENST00000368843 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
SNX27-203ENST00000368843 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
SNX27-203ENST00000368843 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
SNX27-203ENST00000368843 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
SNX27-203ENST00000368843 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
SNX27-203ENST00000368843 RNF213Q63HN8 5207 aa4.59□□□□□ -1.68
SNX27-203ENST00000368843 MUC2Q02817 5179 aa4.5□□□□□ -1.69
SNX27-203ENST00000368843 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
SNX27-203ENST00000368843 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
SNX27-203ENST00000368843 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
SNX27-203ENST00000368843 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
SNX27-203ENST00000368843 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SNX27-203ENST00000368843 KMT2DO14686 5537 aa4.15□□□□□ -1.75
SNX27-203ENST00000368843 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
SNX27-203ENST00000368843 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
SNX27-203ENST00000368843 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
SNX27-203ENST00000368843 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
SNX27-203ENST00000368843 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
SNX27-203ENST00000368843 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
SNX27-203ENST00000368843 NEBP20929 6669 aa3.89□□□□□ -1.79
SNX27-203ENST00000368843 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
SNX27-203ENST00000368843 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
SNX27-203ENST00000368843 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
SNX27-203ENST00000368843 USH2AO75445 5202 aa3.77□□□□□ -1.81
SNX27-203ENST00000368843 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
SNX27-203ENST00000368843 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
SNX27-203ENST00000368843 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
SNX27-203ENST00000368843 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
SNX27-203ENST00000368843 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
SNX27-203ENST00000368843 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
SNX27-203ENST00000368843 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
SNX27-203ENST00000368843 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
SNX27-203ENST00000368843 KRTAP5-8O75690 187 aa2.96□□□□□ -1.93
SNX27-203ENST00000368843 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
SNX27-203ENST00000368843 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
SNX27-203ENST00000368843 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
SNX27-203ENST00000368843 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
SNX27-203ENST00000368843 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
SNX27-203ENST00000368843 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
SNX27-203ENST00000368843 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SNX27-203ENST00000368843 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SNX27-203ENST00000368843 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
SNX27-203ENST00000368843 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SNX27-203ENST00000368843 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
SNX27-203ENST00000368843 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
SNX27-203ENST00000368843 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
SNX27-203ENST00000368843 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
SNX27-203ENST00000368843 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 98.1 ms