RNA–Protein interactions for RNA: ENST00000367696.6

RC3H1-203, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RC3H1, Length 11,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-203ENST00000367696 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
RC3H1-203ENST00000367696 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
RC3H1-203ENST00000367696 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
RC3H1-203ENST00000367696 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
RC3H1-203ENST00000367696 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
RC3H1-203ENST00000367696 MT1MQ8N339 61 aa2.62□□□□□ -1.99
RC3H1-203ENST00000367696 LCE2AQ5TA79 106 aaPredicted RBP2.61□□□□□ -1.99
RC3H1-203ENST00000367696 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
RC3H1-203ENST00000367696 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
RC3H1-203ENST00000367696 SPRR2EP22531 72 aa2.56□□□□□ -2
RC3H1-203ENST00000367696 SPRR2BP35325 72 aa2.56□□□□□ -2
RC3H1-203ENST00000367696 SPRR2AP35326 72 aa2.56□□□□□ -2
RC3H1-203ENST00000367696 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
RC3H1-203ENST00000367696 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
RC3H1-203ENST00000367696 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
RC3H1-203ENST00000367696 LOC100996750A0A140TA64 210 aa2.52□□□□□ -2.01
RC3H1-203ENST00000367696 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
RC3H1-203ENST00000367696 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
RC3H1-203ENST00000367696 SPRR2DP22532 72 aa2.47□□□□□ -2.01
RC3H1-203ENST00000367696 MT1AP04731 61 aa2.47□□□□□ -2.01
RC3H1-203ENST00000367696 MT3P25713 68 aa2.44□□□□□ -2.02
RC3H1-203ENST00000367696 PRM1P04553 51 aa2.41□□□□□ -2.02
RC3H1-203ENST00000367696 LCE2DQ5TA82 110 aaPredicted RBP2.39□□□□□ -2.03
RC3H1-203ENST00000367696 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
RC3H1-203ENST00000367696 MUC12Q9UKN1 5478 aa2.37□□□□□ -2.03
RC3H1-203ENST00000367696 KMT2DO14686 5537 aa2.36□□□□□ -2.03
RC3H1-203ENST00000367696 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
RC3H1-203ENST00000367696 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
RC3H1-203ENST00000367696 LCE5AQ5TCM9 118 aa2.34□□□□□ -2.03
RC3H1-203ENST00000367696 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
RC3H1-203ENST00000367696 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
RC3H1-203ENST00000367696 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
RC3H1-203ENST00000367696 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
RC3H1-203ENST00000367696 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
RC3H1-203ENST00000367696 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
RC3H1-203ENST00000367696 NEBP20929 6669 aa2.19□□□□□ -2.06
RC3H1-203ENST00000367696 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
RC3H1-203ENST00000367696 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
RC3H1-203ENST00000367696 MT4P47944 62 aa2.16□□□□□ -2.06
RC3H1-203ENST00000367696 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
RC3H1-203ENST00000367696 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
RC3H1-203ENST00000367696 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
RC3H1-203ENST00000367696 KRTAP5-9P26371 169 aa2.03□□□□□ -2.08
RC3H1-203ENST00000367696 LCE4AQ5TA78 99 aa2.03□□□□□ -2.08
RC3H1-203ENST00000367696 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
RC3H1-203ENST00000367696 KRTAP9-6A0A140TA67 174 aa2.02□□□□□ -2.09
RC3H1-203ENST00000367696 KRTAP9-1A8MXZ3 250 aaPredicted RBP2□□□□□ -2.09
RC3H1-203ENST00000367696 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
RC3H1-203ENST00000367696 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
RC3H1-203ENST00000367696 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
RC3H1-203ENST00000367696 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
RC3H1-203ENST00000367696 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
RC3H1-203ENST00000367696 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
RC3H1-203ENST00000367696 KRTAP4-6Q9BYQ5 205 aa1.8□□□□□ -2.12
RC3H1-203ENST00000367696 KRTAP4-11Q9BYQ6 195 aa1.78□□□□□ -2.13
RC3H1-203ENST00000367696 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
RC3H1-203ENST00000367696 KRTAP5-4Q6L8H1 288 aa1.69□□□□□ -2.14
RC3H1-203ENST00000367696 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
RC3H1-203ENST00000367696 LCE1FQ5T754 118 aa1.65□□□□□ -2.15
RC3H1-203ENST00000367696 KRTAP9-9Q9BYP9 154 aa1.57□□□□□ -2.16
RC3H1-203ENST00000367696 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
RC3H1-203ENST00000367696 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
RC3H1-203ENST00000367696 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
RC3H1-203ENST00000367696 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
RC3H1-203ENST00000367696 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
RC3H1-203ENST00000367696 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
RC3H1-203ENST00000367696 KRTAP4-2Q9BYR5 136 aa1.46□□□□□ -2.18
RC3H1-203ENST00000367696 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
RC3H1-203ENST00000367696 KRTAP5-8O75690 187 aa1.32□□□□□ -2.2
RC3H1-203ENST00000367696 KRTAP5-1Q6L8H4 278 aa1.31□□□□□ -2.2
RC3H1-203ENST00000367696 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
RC3H1-203ENST00000367696 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
RC3H1-203ENST00000367696 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
RC3H1-203ENST00000367696 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
RC3H1-203ENST00000367696 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
RC3H1-203ENST00000367696 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
RC3H1-203ENST00000367696 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms