RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
CD46-209ENST00000367047 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
CD46-209ENST00000367047 KMT2DO14686 5537 aa2.89□□□□□ -1.95
CD46-209ENST00000367047 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
CD46-209ENST00000367047 KRTAP9-8Q9BYQ0 159 aa2.87□□□□□ -1.95
CD46-209ENST00000367047 MT1HP80294 61 aa2.87□□□□□ -1.95
CD46-209ENST00000367047 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
CD46-209ENST00000367047 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
CD46-209ENST00000367047 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
CD46-209ENST00000367047 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
CD46-209ENST00000367047 USH2AO75445 5202 aa2.76□□□□□ -1.97
CD46-209ENST00000367047 LCE5AQ5TCM9 118 aa2.75□□□□□ -1.97
CD46-209ENST00000367047 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
CD46-209ENST00000367047 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
CD46-209ENST00000367047 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
CD46-209ENST00000367047 MT1LQ93083 61 aa2.67□□□□□ -1.98
CD46-209ENST00000367047 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
CD46-209ENST00000367047 MT1GP13640 62 aa2.62□□□□□ -1.99
CD46-209ENST00000367047 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
CD46-209ENST00000367047 PRM1P04553 51 aa2.6□□□□□ -1.99
CD46-209ENST00000367047 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
CD46-209ENST00000367047 MT1EP04732 61 aa2.59□□□□□ -2
CD46-209ENST00000367047 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
CD46-209ENST00000367047 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
CD46-209ENST00000367047 KRTAP2-2Q9BYT5 123 aa2.55□□□□□ -2
CD46-209ENST00000367047 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
CD46-209ENST00000367047 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
CD46-209ENST00000367047 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
CD46-209ENST00000367047 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
CD46-209ENST00000367047 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
CD46-209ENST00000367047 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
CD46-209ENST00000367047 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
CD46-209ENST00000367047 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
CD46-209ENST00000367047 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
CD46-209ENST00000367047 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
CD46-209ENST00000367047 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
CD46-209ENST00000367047 MT1AP04731 61 aa2.4□□□□□ -2.02
CD46-209ENST00000367047 MT1MQ8N339 61 aa2.4□□□□□ -2.03
CD46-209ENST00000367047 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CD46-209ENST00000367047 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CD46-209ENST00000367047 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
CD46-209ENST00000367047 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
CD46-209ENST00000367047 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
CD46-209ENST00000367047 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
CD46-209ENST00000367047 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
CD46-209ENST00000367047 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
CD46-209ENST00000367047 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
CD46-209ENST00000367047 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
CD46-209ENST00000367047 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
CD46-209ENST00000367047 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
CD46-209ENST00000367047 SPRR2AP35326 72 aa2.02□□□□□ -2.09
CD46-209ENST00000367047 NEBP20929 6669 aa2.01□□□□□ -2.09
CD46-209ENST00000367047 SPRR2EP22531 72 aa2.01□□□□□ -2.09
CD46-209ENST00000367047 SPRR2BP35325 72 aa2□□□□□ -2.09
CD46-209ENST00000367047 MT3P25713 68 aa1.98□□□□□ -2.09
CD46-209ENST00000367047 SPRR2DP22532 72 aa1.96□□□□□ -2.1
CD46-209ENST00000367047 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
CD46-209ENST00000367047 KRTAP5-4Q6L8H1 288 aa1.86□□□□□ -2.11
CD46-209ENST00000367047 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
CD46-209ENST00000367047 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
CD46-209ENST00000367047 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
CD46-209ENST00000367047 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CD46-209ENST00000367047 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
CD46-209ENST00000367047 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
CD46-209ENST00000367047 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
CD46-209ENST00000367047 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
CD46-209ENST00000367047 MT4P47944 62 aa1.65□□□□□ -2.15
CD46-209ENST00000367047 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
CD46-209ENST00000367047 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
CD46-209ENST00000367047 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CD46-209ENST00000367047 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
CD46-209ENST00000367047 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
CD46-209ENST00000367047 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
CD46-209ENST00000367047 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
CD46-209ENST00000367047 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
CD46-209ENST00000367047 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
CD46-209ENST00000367047 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms