RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
FBXO28-201ENST00000366862 MT1AP04731 61 aa4.53□□□□□ -1.68
FBXO28-201ENST00000366862 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
FBXO28-201ENST00000366862 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
FBXO28-201ENST00000366862 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
FBXO28-201ENST00000366862 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
FBXO28-201ENST00000366862 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
FBXO28-201ENST00000366862 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
FBXO28-201ENST00000366862 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
FBXO28-201ENST00000366862 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
FBXO28-201ENST00000366862 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
FBXO28-201ENST00000366862 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
FBXO28-201ENST00000366862 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
FBXO28-201ENST00000366862 MT4P47944 62 aa4.28□□□□□ -1.72
FBXO28-201ENST00000366862 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
FBXO28-201ENST00000366862 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.74
FBXO28-201ENST00000366862 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
FBXO28-201ENST00000366862 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
FBXO28-201ENST00000366862 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
FBXO28-201ENST00000366862 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
FBXO28-201ENST00000366862 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
FBXO28-201ENST00000366862 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
FBXO28-201ENST00000366862 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
FBXO28-201ENST00000366862 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
FBXO28-201ENST00000366862 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
FBXO28-201ENST00000366862 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
FBXO28-201ENST00000366862 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
FBXO28-201ENST00000366862 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
FBXO28-201ENST00000366862 MUC2Q02817 5179 aa3.82□□□□□ -1.8
FBXO28-201ENST00000366862 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
FBXO28-201ENST00000366862 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
FBXO28-201ENST00000366862 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
FBXO28-201ENST00000366862 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
FBXO28-201ENST00000366862 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
FBXO28-201ENST00000366862 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
FBXO28-201ENST00000366862 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
FBXO28-201ENST00000366862 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
FBXO28-201ENST00000366862 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
FBXO28-201ENST00000366862 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
FBXO28-201ENST00000366862 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
FBXO28-201ENST00000366862 USH2AO75445 5202 aa3.54□□□□□ -1.84
FBXO28-201ENST00000366862 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
FBXO28-201ENST00000366862 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
FBXO28-201ENST00000366862 KMT2DO14686 5537 aa3.35□□□□□ -1.87
FBXO28-201ENST00000366862 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
FBXO28-201ENST00000366862 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
FBXO28-201ENST00000366862 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
FBXO28-201ENST00000366862 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
FBXO28-201ENST00000366862 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
FBXO28-201ENST00000366862 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
FBXO28-201ENST00000366862 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
FBXO28-201ENST00000366862 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
FBXO28-201ENST00000366862 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
FBXO28-201ENST00000366862 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
FBXO28-201ENST00000366862 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
FBXO28-201ENST00000366862 NEBP20929 6669 aa2.91□□□□□ -1.94
FBXO28-201ENST00000366862 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
FBXO28-201ENST00000366862 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
FBXO28-201ENST00000366862 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
FBXO28-201ENST00000366862 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
FBXO28-201ENST00000366862 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
FBXO28-201ENST00000366862 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
FBXO28-201ENST00000366862 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
FBXO28-201ENST00000366862 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
FBXO28-201ENST00000366862 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
FBXO28-201ENST00000366862 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
FBXO28-201ENST00000366862 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
FBXO28-201ENST00000366862 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
FBXO28-201ENST00000366862 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
FBXO28-201ENST00000366862 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
FBXO28-201ENST00000366862 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
FBXO28-201ENST00000366862 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
FBXO28-201ENST00000366862 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
FBXO28-201ENST00000366862 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
FBXO28-201ENST00000366862 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
FBXO28-201ENST00000366862 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
FBXO28-201ENST00000366862 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms