RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
PARP1-201ENST00000366790 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
PARP1-201ENST00000366790 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
PARP1-201ENST00000366790 MT4P47944 62 aa3.62□□□□□ -1.83
PARP1-201ENST00000366790 PCP4P48539 62 aa3.61□□□□□ -1.83
PARP1-201ENST00000366790 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
PARP1-201ENST00000366790 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
PARP1-201ENST00000366790 UQCR11O14957 56 aa3.56□□□□□ -1.84
PARP1-201ENST00000366790 Q1T7F1 81 aa3.56□□□□□ -1.84
PARP1-201ENST00000366790 V9GYY9 64 aa3.54□□□□□ -1.84
PARP1-201ENST00000366790 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
PARP1-201ENST00000366790 RPS28P62857 69 aaKnown RBP3.52□□□□□ -1.85
PARP1-201ENST00000366790 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
PARP1-201ENST00000366790 PSPHP1O15172 72 aa3.51□□□□□ -1.85
PARP1-201ENST00000366790 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
PARP1-201ENST00000366790 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
PARP1-201ENST00000366790 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
PARP1-201ENST00000366790 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
PARP1-201ENST00000366790 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
PARP1-201ENST00000366790 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
PARP1-201ENST00000366790 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
PARP1-201ENST00000366790 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
PARP1-201ENST00000366790 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
PARP1-201ENST00000366790 A6NED7 52 aa3.39□□□□□ -1.87
PARP1-201ENST00000366790 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
PARP1-201ENST00000366790 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
PARP1-201ENST00000366790 K7ERS5 55 aa3.36□□□□□ -1.87
PARP1-201ENST00000366790 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
PARP1-201ENST00000366790 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
PARP1-201ENST00000366790 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
PARP1-201ENST00000366790 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
PARP1-201ENST00000366790 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
PARP1-201ENST00000366790 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
PARP1-201ENST00000366790 ROMO1P60602 79 aa3.2□□□□□ -1.9
PARP1-201ENST00000366790 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
PARP1-201ENST00000366790 MT1AP04731 61 aa3.16□□□□□ -1.9
PARP1-201ENST00000366790 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
PARP1-201ENST00000366790 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
PARP1-201ENST00000366790 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
PARP1-201ENST00000366790 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
PARP1-201ENST00000366790 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
PARP1-201ENST00000366790 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
PARP1-201ENST00000366790 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
PARP1-201ENST00000366790 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
PARP1-201ENST00000366790 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
PARP1-201ENST00000366790 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
PARP1-201ENST00000366790 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
PARP1-201ENST00000366790 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
PARP1-201ENST00000366790 MT3P25713 68 aa2.89□□□□□ -1.95
PARP1-201ENST00000366790 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
PARP1-201ENST00000366790 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
PARP1-201ENST00000366790 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
PARP1-201ENST00000366790 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
PARP1-201ENST00000366790 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
PARP1-201ENST00000366790 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
PARP1-201ENST00000366790 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
PARP1-201ENST00000366790 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
PARP1-201ENST00000366790 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
PARP1-201ENST00000366790 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
PARP1-201ENST00000366790 SVIPQ8NHG7 77 aa2.49□□□□□ -2.01
PARP1-201ENST00000366790 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
PARP1-201ENST00000366790 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
PARP1-201ENST00000366790 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
PARP1-201ENST00000366790 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
PARP1-201ENST00000366790 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
PARP1-201ENST00000366790 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
PARP1-201ENST00000366790 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PARP1-201ENST00000366790 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
PARP1-201ENST00000366790 NDUFAF8A1L188 74 aa1.99□□□□□ -2.09
PARP1-201ENST00000366790 H3BS24 57 aa1.97□□□□□ -2.09
PARP1-201ENST00000366790 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
PARP1-201ENST00000366790 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
PARP1-201ENST00000366790 A0A0A0MQY5 61 aa1.67□□□□□ -2.14
PARP1-201ENST00000366790 PRM1P04553 51 aa1.65□□□□□ -2.15
PARP1-201ENST00000366790 INE1O15225 51 aa1.62□□□□□ -2.15
PARP1-201ENST00000366790 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
PARP1-201ENST00000366790 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 217.6 ms