RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
LDLRAD4-201ENST00000359446 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
LDLRAD4-201ENST00000359446 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
LDLRAD4-201ENST00000359446 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
LDLRAD4-201ENST00000359446 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
LDLRAD4-201ENST00000359446 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
LDLRAD4-201ENST00000359446 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
LDLRAD4-201ENST00000359446 MT1AP04731 61 aa3.6□□□□□ -1.83
LDLRAD4-201ENST00000359446 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
LDLRAD4-201ENST00000359446 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
LDLRAD4-201ENST00000359446 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LDLRAD4-201ENST00000359446 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
LDLRAD4-201ENST00000359446 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
LDLRAD4-201ENST00000359446 RYR2Q92736 4967 aa3.54□□□□□ -1.84
LDLRAD4-201ENST00000359446 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
LDLRAD4-201ENST00000359446 HERC2O95714 4834 aa3.5□□□□□ -1.85
LDLRAD4-201ENST00000359446 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
LDLRAD4-201ENST00000359446 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
LDLRAD4-201ENST00000359446 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
LDLRAD4-201ENST00000359446 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
LDLRAD4-201ENST00000359446 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
LDLRAD4-201ENST00000359446 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
LDLRAD4-201ENST00000359446 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
LDLRAD4-201ENST00000359446 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
LDLRAD4-201ENST00000359446 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
LDLRAD4-201ENST00000359446 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
LDLRAD4-201ENST00000359446 HMCN2Q8NDA2 5059 aa3.33□□□□□ -1.88
LDLRAD4-201ENST00000359446 HERC1Q15751 4861 aa3.31□□□□□ -1.88
LDLRAD4-201ENST00000359446 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
LDLRAD4-201ENST00000359446 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.26□□□□□ -1.89
LDLRAD4-201ENST00000359446 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
LDLRAD4-201ENST00000359446 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
LDLRAD4-201ENST00000359446 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
LDLRAD4-201ENST00000359446 MUC2Q02817 5179 aa3.13□□□□□ -1.91
LDLRAD4-201ENST00000359446 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
LDLRAD4-201ENST00000359446 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
LDLRAD4-201ENST00000359446 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
LDLRAD4-201ENST00000359446 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
LDLRAD4-201ENST00000359446 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
LDLRAD4-201ENST00000359446 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.94
LDLRAD4-201ENST00000359446 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
LDLRAD4-201ENST00000359446 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
LDLRAD4-201ENST00000359446 KMT2DO14686 5537 aa2.82□□□□□ -1.96
LDLRAD4-201ENST00000359446 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
LDLRAD4-201ENST00000359446 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
LDLRAD4-201ENST00000359446 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
LDLRAD4-201ENST00000359446 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
LDLRAD4-201ENST00000359446 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
LDLRAD4-201ENST00000359446 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
LDLRAD4-201ENST00000359446 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
LDLRAD4-201ENST00000359446 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
LDLRAD4-201ENST00000359446 NEBP20929 6669 aa2.59□□□□□ -2
LDLRAD4-201ENST00000359446 USH2AO75445 5202 aa2.52□□□□□ -2.01
LDLRAD4-201ENST00000359446 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
LDLRAD4-201ENST00000359446 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
LDLRAD4-201ENST00000359446 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
LDLRAD4-201ENST00000359446 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
LDLRAD4-201ENST00000359446 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.04
LDLRAD4-201ENST00000359446 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
LDLRAD4-201ENST00000359446 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
LDLRAD4-201ENST00000359446 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
LDLRAD4-201ENST00000359446 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
LDLRAD4-201ENST00000359446 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
LDLRAD4-201ENST00000359446 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
LDLRAD4-201ENST00000359446 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
LDLRAD4-201ENST00000359446 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
LDLRAD4-201ENST00000359446 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
LDLRAD4-201ENST00000359446 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
LDLRAD4-201ENST00000359446 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
LDLRAD4-201ENST00000359446 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
LDLRAD4-201ENST00000359446 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
LDLRAD4-201ENST00000359446 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
LDLRAD4-201ENST00000359446 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
LDLRAD4-201ENST00000359446 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
LDLRAD4-201ENST00000359446 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
LDLRAD4-201ENST00000359446 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
LDLRAD4-201ENST00000359446 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms