RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
LMBR1-202ENST00000359422 MT1LQ93083 61 aa5.31□□□□□ -1.56
LMBR1-202ENST00000359422 MT1EP04732 61 aa5.25□□□□□ -1.57
LMBR1-202ENST00000359422 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
LMBR1-202ENST00000359422 USH2AO75445 5202 aa5.15□□□□□ -1.58
LMBR1-202ENST00000359422 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
LMBR1-202ENST00000359422 MT1MQ8N339 61 aa5.1□□□□□ -1.59
LMBR1-202ENST00000359422 KMT2DO14686 5537 aa5.07□□□□□ -1.6
LMBR1-202ENST00000359422 MT3P25713 68 aa5.04□□□□□ -1.6
LMBR1-202ENST00000359422 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
LMBR1-202ENST00000359422 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
LMBR1-202ENST00000359422 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
LMBR1-202ENST00000359422 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
LMBR1-202ENST00000359422 MT4P47944 62 aa4.97□□□□□ -1.61
LMBR1-202ENST00000359422 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
LMBR1-202ENST00000359422 PRM1P04553 51 aa4.91□□□□□ -1.62
LMBR1-202ENST00000359422 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
LMBR1-202ENST00000359422 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
LMBR1-202ENST00000359422 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
LMBR1-202ENST00000359422 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
LMBR1-202ENST00000359422 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
LMBR1-202ENST00000359422 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
LMBR1-202ENST00000359422 MT1AP04731 61 aa4.74□□□□□ -1.65
LMBR1-202ENST00000359422 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
LMBR1-202ENST00000359422 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
LMBR1-202ENST00000359422 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
LMBR1-202ENST00000359422 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
LMBR1-202ENST00000359422 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
LMBR1-202ENST00000359422 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
LMBR1-202ENST00000359422 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
LMBR1-202ENST00000359422 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
LMBR1-202ENST00000359422 MUC19Q7Z5P9 8384 aa4.5□□□□□ -1.69
LMBR1-202ENST00000359422 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
LMBR1-202ENST00000359422 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
LMBR1-202ENST00000359422 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
LMBR1-202ENST00000359422 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
LMBR1-202ENST00000359422 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
LMBR1-202ENST00000359422 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
LMBR1-202ENST00000359422 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
LMBR1-202ENST00000359422 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
LMBR1-202ENST00000359422 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
LMBR1-202ENST00000359422 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-202ENST00000359422 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
LMBR1-202ENST00000359422 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
LMBR1-202ENST00000359422 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
LMBR1-202ENST00000359422 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
LMBR1-202ENST00000359422 LCE1FQ5T754 118 aa4.09□□□□□ -1.76
LMBR1-202ENST00000359422 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
LMBR1-202ENST00000359422 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
LMBR1-202ENST00000359422 NEBP20929 6669 aa3.88□□□□□ -1.79
LMBR1-202ENST00000359422 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
LMBR1-202ENST00000359422 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
LMBR1-202ENST00000359422 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
LMBR1-202ENST00000359422 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
LMBR1-202ENST00000359422 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
LMBR1-202ENST00000359422 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
LMBR1-202ENST00000359422 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
LMBR1-202ENST00000359422 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.88
LMBR1-202ENST00000359422 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.88
LMBR1-202ENST00000359422 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
LMBR1-202ENST00000359422 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
LMBR1-202ENST00000359422 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
LMBR1-202ENST00000359422 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
LMBR1-202ENST00000359422 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
LMBR1-202ENST00000359422 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
LMBR1-202ENST00000359422 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
LMBR1-202ENST00000359422 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
LMBR1-202ENST00000359422 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
LMBR1-202ENST00000359422 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
LMBR1-202ENST00000359422 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
LMBR1-202ENST00000359422 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
LMBR1-202ENST00000359422 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
LMBR1-202ENST00000359422 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
LMBR1-202ENST00000359422 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
LMBR1-202ENST00000359422 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
LMBR1-202ENST00000359422 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
LMBR1-202ENST00000359422 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms