RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
NF1-202ENST00000358273 KRTAP2-2Q9BYT5 123 aa1.9□□□□□ -2.1
NF1-202ENST00000358273 LCE2BO14633 110 aa1.9□□□□□ -2.11
NF1-202ENST00000358273 MT4P47944 62 aa1.9□□□□□ -2.11
NF1-202ENST00000358273 SPRR2DP22532 72 aa1.89□□□□□ -2.11
NF1-202ENST00000358273 RYR2Q92736 4967 aa1.89□□□□□ -2.11
NF1-202ENST00000358273 MT3P25713 68 aa1.87□□□□□ -2.11
NF1-202ENST00000358273 RYR1P21817 5038 aa1.86□□□□□ -2.11
NF1-202ENST00000358273 LPAP08519 4548 aa1.85□□□□□ -2.11
NF1-202ENST00000358273 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
NF1-202ENST00000358273 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
NF1-202ENST00000358273 LRP2P98164 4655 aa1.81□□□□□ -2.12
NF1-202ENST00000358273 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
NF1-202ENST00000358273 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
NF1-202ENST00000358273 RYR3Q15413 4870 aa1.78□□□□□ -2.12
NF1-202ENST00000358273 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
NF1-202ENST00000358273 LCE2AQ5TA79 106 aaPredicted RBP1.76□□□□□ -2.13
NF1-202ENST00000358273 KMT2CQ8NEZ4 4911 aaKnown RBP1.72□□□□□ -2.13
NF1-202ENST00000358273 LCE2DQ5TA82 110 aaPredicted RBP1.72□□□□□ -2.13
NF1-202ENST00000358273 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
NF1-202ENST00000358273 HERC2O95714 4834 aa1.7□□□□□ -2.14
NF1-202ENST00000358273 LCE5AQ5TCM9 118 aa1.7□□□□□ -2.14
NF1-202ENST00000358273 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
NF1-202ENST00000358273 BIRC6Q9NR09 4857 aa1.69□□□□□ -2.14
NF1-202ENST00000358273 HYDINQ4G0P3 5121 aa1.68□□□□□ -2.14
NF1-202ENST00000358273 LCE1CQ5T751 118 aa1.65□□□□□ -2.14
NF1-202ENST00000358273 UBR4Q5T4S7 5183 aa1.63□□□□□ -2.15
NF1-202ENST00000358273 ABCA13Q86UQ4 5058 aa1.61□□□□□ -2.15
NF1-202ENST00000358273 KRTAP9-4Q9BYQ2 154 aa1.61□□□□□ -2.15
NF1-202ENST00000358273 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
NF1-202ENST00000358273 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
NF1-202ENST00000358273 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.15
NF1-202ENST00000358273 HERC1Q15751 4861 aa1.57□□□□□ -2.16
NF1-202ENST00000358273 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
NF1-202ENST00000358273 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
NF1-202ENST00000358273 EPPK1P58107 5090 aaKnown RBP1.52□□□□□ -2.17
NF1-202ENST00000358273 MUC2Q02817 5179 aa1.48□□□□□ -2.17
NF1-202ENST00000358273 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
NF1-202ENST00000358273 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
NF1-202ENST00000358273 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
NF1-202ENST00000358273 KMT2DO14686 5537 aa1.45□□□□□ -2.18
NF1-202ENST00000358273 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
NF1-202ENST00000358273 FAT4Q6V0I7 4981 aa1.43□□□□□ -2.18
NF1-202ENST00000358273 KRTAP4-12Q9BQ66 201 aa1.4□□□□□ -2.19
NF1-202ENST00000358273 KRTAP4-2Q9BYR5 136 aa1.4□□□□□ -2.19
NF1-202ENST00000358273 USH2AO75445 5202 aa1.38□□□□□ -2.19
NF1-202ENST00000358273 MACF1Q9UPN3 7388 aaKnown RBP1.38□□□□□ -2.19
NF1-202ENST00000358273 FSIP2Q5CZC0 6907 aa1.38□□□□□ -2.19
NF1-202ENST00000358273 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
NF1-202ENST00000358273 KRTAP4-6Q9BYQ5 205 aa1.35□□□□□ -2.19
NF1-202ENST00000358273 KRTAP9-9Q9BYP9 154 aa1.34□□□□□ -2.19
NF1-202ENST00000358273 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.34□□□□□ -2.19
NF1-202ENST00000358273 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
NF1-202ENST00000358273 KRTAP5-9P26371 169 aa1.31□□□□□ -2.2
NF1-202ENST00000358273 MDN1Q9NU22 5596 aa1.27□□□□□ -2.21
NF1-202ENST00000358273 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
NF1-202ENST00000358273 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
NF1-202ENST00000358273 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
NF1-202ENST00000358273 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
NF1-202ENST00000358273 KRTAP5-4Q6L8H1 288 aa1.21□□□□□ -2.22
NF1-202ENST00000358273 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
NF1-202ENST00000358273 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
NF1-202ENST00000358273 NEBP20929 6669 aa1.15□□□□□ -2.23
NF1-202ENST00000358273 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
NF1-202ENST00000358273 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
NF1-202ENST00000358273 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
NF1-202ENST00000358273 KRTAP5-8O75690 187 aa1□□□□□ -2.25
NF1-202ENST00000358273 KRTAP5-3Q6L8H2 238 aa1□□□□□ -2.25
NF1-202ENST00000358273 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
NF1-202ENST00000358273 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
NF1-202ENST00000358273 MUC5BQ9HC84 5762 aaPredicted RBP0.94□□□□□ -2.26
NF1-202ENST00000358273 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
NF1-202ENST00000358273 KRTAP5-11Q6L8G4 156 aa0.83□□□□□ -2.28
NF1-202ENST00000358273 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.82□□□□□ -2.28
NF1-202ENST00000358273 KRTAP5-7Q6L8G8 165 aa0.79□□□□□ -2.28
NF1-202ENST00000358273 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
NF1-202ENST00000358273 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 69.3 ms