RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 SYNE2Q8WXH0 6885 aaKnown RBP9.72□□□□□ -0.85
SDCCAG3-202ENST00000357365 CRCT1Q9UGL9 99 aa9.71□□□□□ -0.85
SDCCAG3-202ENST00000357365 SPRR2FQ96RM1 72 aa9.68□□□□□ -0.86
SDCCAG3-202ENST00000357365 KRTAP19-3Q7Z4W3 81 aa9.66□□□□□ -0.86
SDCCAG3-202ENST00000357365 KRTAP4-3Q9BYR4 195 aa9.65□□□□□ -0.86
SDCCAG3-202ENST00000357365 MT1MQ8N339 61 aa9.57□□□□□ -0.88
SDCCAG3-202ENST00000357365 MT1GP13640 62 aa9.55□□□□□ -0.88
SDCCAG3-202ENST00000357365 A0A0A0MQY5 61 aa9.48□□□□□ -0.89
SDCCAG3-202ENST00000357365 LOC100996750A0A140TA64 210 aa9.44□□□□□ -0.9
SDCCAG3-202ENST00000357365 LCE5AQ5TCM9 118 aa9.44□□□□□ -0.9
SDCCAG3-202ENST00000357365 MDN1Q9NU22 5596 aa9.41□□□□□ -0.9
SDCCAG3-202ENST00000357365 DSTQ03001 7570 aaKnown RBP9.4□□□□□ -0.9
SDCCAG3-202ENST00000357365 KRTAP5-9P26371 169 aa9.26□□□□□ -0.93
SDCCAG3-202ENST00000357365 KRTAP2-3P0C7H8 128 aa9.17□□□□□ -0.94
SDCCAG3-202ENST00000357365 KRTAP2-4Q9BYR9 128 aa9.17□□□□□ -0.94
SDCCAG3-202ENST00000357365 KRTAP2-1Q9BYU5 128 aa9.17□□□□□ -0.94
SDCCAG3-202ENST00000357365 LCE1AQ5T7P2 110 aa9.15□□□□□ -0.94
SDCCAG3-202ENST00000357365 SPRR2EP22531 72 aa9□□□□□ -0.97
SDCCAG3-202ENST00000357365 SPRR2BP35325 72 aa9□□□□□ -0.97
SDCCAG3-202ENST00000357365 SPRR2AP35326 72 aa9□□□□□ -0.97
SDCCAG3-202ENST00000357365 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.98□□□□□ -0.97
SDCCAG3-202ENST00000357365 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
SDCCAG3-202ENST00000357365 KRTAP6-3Q3LI67 103 aa8.81□□□□□ -1
SDCCAG3-202ENST00000357365 INE1O15225 51 aa8.72□□□□□ -1.01
SDCCAG3-202ENST00000357365 SPRR2DP22532 72 aa8.63□□□□□ -1.03
SDCCAG3-202ENST00000357365 KRTAP6-1Q3LI64 71 aa8.57□□□□□ -1.04
SDCCAG3-202ENST00000357365 KRTAP5-5Q701N2 237 aaPredicted RBP8.55□□□□□ -1.04
SDCCAG3-202ENST00000357365 LCE3BQ5TA77 95 aa8.48□□□□□ -1.05
SDCCAG3-202ENST00000357365 MT1AP04731 61 aa8.47□□□□□ -1.05
SDCCAG3-202ENST00000357365 SYNE1Q8NF91 8797 aaKnown RBP8.45□□□□□ -1.06
SDCCAG3-202ENST00000357365 NEBP20929 6669 aa8.37□□□□□ -1.07
SDCCAG3-202ENST00000357365 KRTAP9-7A8MTY7 169 aa8.29□□□□□ -1.08
SDCCAG3-202ENST00000357365 KRTAP4-9Q9BYQ8 210 aa8.23□□□□□ -1.09
SDCCAG3-202ENST00000357365 KRTAP9-4Q9BYQ2 154 aa8.03□□□□□ -1.12
SDCCAG3-202ENST00000357365 KRTAP12-4P60329 112 aa7.96□□□□□ -1.13
SDCCAG3-202ENST00000357365 KRTAP5-4Q6L8H1 288 aa7.85□□□□□ -1.15
SDCCAG3-202ENST00000357365 KRTAP6-2Q3LI66 62 aa7.79□□□□□ -1.16
SDCCAG3-202ENST00000357365 LCE3DQ9BYE3 92 aa7.75□□□□□ -1.17
SDCCAG3-202ENST00000357365 KRTAP4-6Q9BYQ5 205 aa7.64□□□□□ -1.19
SDCCAG3-202ENST00000357365 MT4P47944 62 aa7.62□□□□□ -1.19
SDCCAG3-202ENST00000357365 OBSCNQ5VST9 7968 aa7.62□□□□□ -1.19
SDCCAG3-202ENST00000357365 MT3P25713 68 aa7.62□□□□□ -1.19
SDCCAG3-202ENST00000357365 LCE3EQ5T5B0 92 aa7.57□□□□□ -1.2
SDCCAG3-202ENST00000357365 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
SDCCAG3-202ENST00000357365 KRTAP2-2Q9BYT5 123 aa7.47□□□□□ -1.21
SDCCAG3-202ENST00000357365 HMCN1Q96RW7 5635 aa7.42□□□□□ -1.22
SDCCAG3-202ENST00000357365 KRTAP20-2Q3LI61 65 aa7.4□□□□□ -1.23
SDCCAG3-202ENST00000357365 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
SDCCAG3-202ENST00000357365 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
SDCCAG3-202ENST00000357365 KRTAP5-2Q701N4 177 aa7.22□□□□□ -1.25
SDCCAG3-202ENST00000357365 KRTAP5-3Q6L8H2 238 aa7.09□□□□□ -1.28
SDCCAG3-202ENST00000357365 PRM1P04553 51 aa6.96□□□□□ -1.3
SDCCAG3-202ENST00000357365 MUC5ACP98088 5654 aa6.44□□□□□ -1.38
SDCCAG3-202ENST00000357365 LCE1EQ5T753 118 aa6.41□□□□□ -1.38
SDCCAG3-202ENST00000357365 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
SDCCAG3-202ENST00000357365 KRTAP4-11Q9BYQ6 195 aa6.28□□□□□ -1.4
SDCCAG3-202ENST00000357365 KRTAP5-1Q6L8H4 278 aa6.24□□□□□ -1.41
SDCCAG3-202ENST00000357365 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
SDCCAG3-202ENST00000357365 KRTAP5-10Q6L8G5 202 aa6.13□□□□□ -1.43
SDCCAG3-202ENST00000357365 KRTAP4-2Q9BYR5 136 aa6.13□□□□□ -1.43
SDCCAG3-202ENST00000357365 KRTAP5-8O75690 187 aa6.04□□□□□ -1.44
SDCCAG3-202ENST00000357365 LCE1CQ5T751 118 aa6.04□□□□□ -1.44
SDCCAG3-202ENST00000357365 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
SDCCAG3-202ENST00000357365 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.65□□□□□ -1.5
SDCCAG3-202ENST00000357365 KRTAP21-2Q3LI59 83 aa5.56□□□□□ -1.52
SDCCAG3-202ENST00000357365 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
SDCCAG3-202ENST00000357365 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
SDCCAG3-202ENST00000357365 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
SDCCAG3-202ENST00000357365 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
SDCCAG3-202ENST00000357365 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
SDCCAG3-202ENST00000357365 KRTAP4-4Q9BYR3 166 aa5.11□□□□□ -1.59
SDCCAG3-202ENST00000357365 MUC19Q7Z5P9 8384 aa4.57□□□□□ -1.68
SDCCAG3-202ENST00000357365 PHGR1C9JFL3 82 aa4.56□□□□□ -1.68
SDCCAG3-202ENST00000357365 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
SDCCAG3-202ENST00000357365 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
SDCCAG3-202ENST00000357365 KRTAP21-1Q3LI58 79 aa4.26□□□□□ -1.73
SDCCAG3-202ENST00000357365 MUC16Q8WXI7 14507 aa2.98□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms