RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 RYR2Q92736 4967 aa3.99□□□□□ -1.77
LMBR1-201ENST00000353442 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
LMBR1-201ENST00000353442 PKD1P98161 4303 aa3.99□□□□□ -1.77
LMBR1-201ENST00000353442 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
LMBR1-201ENST00000353442 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
LMBR1-201ENST00000353442 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
LMBR1-201ENST00000353442 HSPG2P98160 4391 aa3.92□□□□□ -1.78
LMBR1-201ENST00000353442 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.79
LMBR1-201ENST00000353442 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
LMBR1-201ENST00000353442 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
LMBR1-201ENST00000353442 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
LMBR1-201ENST00000353442 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
LMBR1-201ENST00000353442 LRP2P98164 4655 aa3.82□□□□□ -1.8
LMBR1-201ENST00000353442 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
LMBR1-201ENST00000353442 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
LMBR1-201ENST00000353442 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
LMBR1-201ENST00000353442 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
LMBR1-201ENST00000353442 MT1AP04731 61 aa3.74□□□□□ -1.81
LMBR1-201ENST00000353442 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
LMBR1-201ENST00000353442 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
LMBR1-201ENST00000353442 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
LMBR1-201ENST00000353442 TNXBP22105 4242 aa3.65□□□□□ -1.83
LMBR1-201ENST00000353442 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
LMBR1-201ENST00000353442 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
LMBR1-201ENST00000353442 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
LMBR1-201ENST00000353442 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
LMBR1-201ENST00000353442 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
LMBR1-201ENST00000353442 MUC2Q02817 5179 aa3.6□□□□□ -1.83
LMBR1-201ENST00000353442 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
LMBR1-201ENST00000353442 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.84
LMBR1-201ENST00000353442 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
LMBR1-201ENST00000353442 LCE2AQ5TA79 106 aaPredicted RBP3.57□□□□□ -1.84
LMBR1-201ENST00000353442 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
LMBR1-201ENST00000353442 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
LMBR1-201ENST00000353442 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
LMBR1-201ENST00000353442 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
LMBR1-201ENST00000353442 FAT4Q6V0I7 4981 aa3.46□□□□□ -1.86
LMBR1-201ENST00000353442 RNF213Q63HN8 5207 aa3.45□□□□□ -1.86
LMBR1-201ENST00000353442 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
LMBR1-201ENST00000353442 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
LMBR1-201ENST00000353442 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
LMBR1-201ENST00000353442 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
LMBR1-201ENST00000353442 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
LMBR1-201ENST00000353442 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
LMBR1-201ENST00000353442 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
LMBR1-201ENST00000353442 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
LMBR1-201ENST00000353442 USH2AO75445 5202 aa3.17□□□□□ -1.9
LMBR1-201ENST00000353442 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
LMBR1-201ENST00000353442 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
LMBR1-201ENST00000353442 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
LMBR1-201ENST00000353442 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
LMBR1-201ENST00000353442 KMT2DO14686 5537 aa2.87□□□□□ -1.95
LMBR1-201ENST00000353442 NEBP20929 6669 aa2.86□□□□□ -1.95
LMBR1-201ENST00000353442 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
LMBR1-201ENST00000353442 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
LMBR1-201ENST00000353442 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
LMBR1-201ENST00000353442 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
LMBR1-201ENST00000353442 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
LMBR1-201ENST00000353442 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
LMBR1-201ENST00000353442 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
LMBR1-201ENST00000353442 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
LMBR1-201ENST00000353442 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.04
LMBR1-201ENST00000353442 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
LMBR1-201ENST00000353442 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
LMBR1-201ENST00000353442 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
LMBR1-201ENST00000353442 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
LMBR1-201ENST00000353442 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
LMBR1-201ENST00000353442 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
LMBR1-201ENST00000353442 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
LMBR1-201ENST00000353442 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
LMBR1-201ENST00000353442 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
LMBR1-201ENST00000353442 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
LMBR1-201ENST00000353442 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
LMBR1-201ENST00000353442 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
LMBR1-201ENST00000353442 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
LMBR1-201ENST00000353442 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
LMBR1-201ENST00000353442 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 32.3 ms