RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
ATR-201ENST00000350721 MT1MQ8N339 61 aa2.35□□□□□ -2.03
ATR-201ENST00000350721 KRTAP4-7Q9BYR0 210 aa2.34□□□□□ -2.03
ATR-201ENST00000350721 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
ATR-201ENST00000350721 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
ATR-201ENST00000350721 LCE2AQ5TA79 106 aaPredicted RBP2.3□□□□□ -2.04
ATR-201ENST00000350721 MT1AP04731 61 aa2.28□□□□□ -2.04
ATR-201ENST00000350721 MT3P25713 68 aa2.21□□□□□ -2.06
ATR-201ENST00000350721 PRM1P04553 51 aa2.2□□□□□ -2.06
ATR-201ENST00000350721 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
ATR-201ENST00000350721 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
ATR-201ENST00000350721 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
ATR-201ENST00000350721 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
ATR-201ENST00000350721 SPRR2EP22531 72 aa2.16□□□□□ -2.06
ATR-201ENST00000350721 SPRR2BP35325 72 aa2.16□□□□□ -2.06
ATR-201ENST00000350721 SPRR2AP35326 72 aa2.16□□□□□ -2.06
ATR-201ENST00000350721 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
ATR-201ENST00000350721 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
ATR-201ENST00000350721 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
ATR-201ENST00000350721 LCE1AQ5T7P2 110 aa2.12□□□□□ -2.07
ATR-201ENST00000350721 SPRR2DP22532 72 aa2.1□□□□□ -2.07
ATR-201ENST00000350721 KMT2DO14686 5537 aa2.08□□□□□ -2.08
ATR-201ENST00000350721 LCE2DQ5TA82 110 aaPredicted RBP2.08□□□□□ -2.08
ATR-201ENST00000350721 KRTAP9-2Q9BYQ4 174 aa2.06□□□□□ -2.08
ATR-201ENST00000350721 USH2AO75445 5202 aa2.05□□□□□ -2.08
ATR-201ENST00000350721 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
ATR-201ENST00000350721 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
ATR-201ENST00000350721 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
ATR-201ENST00000350721 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
ATR-201ENST00000350721 KRTAP9-4Q9BYQ2 154 aa2□□□□□ -2.09
ATR-201ENST00000350721 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
ATR-201ENST00000350721 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
ATR-201ENST00000350721 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
ATR-201ENST00000350721 KRTAP2-2Q9BYT5 123 aa1.94□□□□□ -2.1
ATR-201ENST00000350721 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
ATR-201ENST00000350721 KRTAP5-9P26371 169 aa1.87□□□□□ -2.11
ATR-201ENST00000350721 KRTAP9-6A0A140TA67 174 aa1.83□□□□□ -2.12
ATR-201ENST00000350721 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
ATR-201ENST00000350721 LCE1DQ5T752 114 aa1.83□□□□□ -2.12
ATR-201ENST00000350721 LCE4AQ5TA78 99 aa1.83□□□□□ -2.12
ATR-201ENST00000350721 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
ATR-201ENST00000350721 MT4P47944 62 aa1.78□□□□□ -2.12
ATR-201ENST00000350721 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
ATR-201ENST00000350721 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
ATR-201ENST00000350721 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
ATR-201ENST00000350721 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
ATR-201ENST00000350721 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.65□□□□□ -2.15
ATR-201ENST00000350721 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
ATR-201ENST00000350721 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
ATR-201ENST00000350721 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
ATR-201ENST00000350721 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.16
ATR-201ENST00000350721 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
ATR-201ENST00000350721 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
ATR-201ENST00000350721 KRTAP4-11Q9BYQ6 195 aa1.56□□□□□ -2.16
ATR-201ENST00000350721 NEBP20929 6669 aa1.55□□□□□ -2.16
ATR-201ENST00000350721 KRTAP4-6Q9BYQ5 205 aa1.54□□□□□ -2.16
ATR-201ENST00000350721 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
ATR-201ENST00000350721 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
ATR-201ENST00000350721 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
ATR-201ENST00000350721 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
ATR-201ENST00000350721 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
ATR-201ENST00000350721 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
ATR-201ENST00000350721 KRTAP9-9Q9BYP9 154 aa1.35□□□□□ -2.19
ATR-201ENST00000350721 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
ATR-201ENST00000350721 KRTAP5-3Q6L8H2 238 aa1.33□□□□□ -2.2
ATR-201ENST00000350721 KRTAP5-1Q6L8H4 278 aa1.31□□□□□ -2.2
ATR-201ENST00000350721 KRTAP4-2Q9BYR5 136 aa1.3□□□□□ -2.2
ATR-201ENST00000350721 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
ATR-201ENST00000350721 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
ATR-201ENST00000350721 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
ATR-201ENST00000350721 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
ATR-201ENST00000350721 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
ATR-201ENST00000350721 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
ATR-201ENST00000350721 KRTAP4-12Q9BQ66 201 aa1.14□□□□□ -2.23
ATR-201ENST00000350721 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
ATR-201ENST00000350721 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
ATR-201ENST00000350721 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 108.5 ms