RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
SEC13-202ENST00000350697 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
SEC13-202ENST00000350697 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
SEC13-202ENST00000350697 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
SEC13-202ENST00000350697 MT1EP04732 61 aa5.16□□□□□ -1.58
SEC13-202ENST00000350697 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
SEC13-202ENST00000350697 SPRR2DP22532 72 aa5.12□□□□□ -1.59
SEC13-202ENST00000350697 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
SEC13-202ENST00000350697 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
SEC13-202ENST00000350697 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
SEC13-202ENST00000350697 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
SEC13-202ENST00000350697 KRTAP12-3P60328 96 aa5□□□□□ -1.61
SEC13-202ENST00000350697 MT1GP13640 62 aa4.98□□□□□ -1.61
SEC13-202ENST00000350697 MT1LQ93083 61 aa4.98□□□□□ -1.61
SEC13-202ENST00000350697 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
SEC13-202ENST00000350697 MT1MQ8N339 61 aa4.89□□□□□ -1.63
SEC13-202ENST00000350697 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
SEC13-202ENST00000350697 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
SEC13-202ENST00000350697 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
SEC13-202ENST00000350697 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
SEC13-202ENST00000350697 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SEC13-202ENST00000350697 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
SEC13-202ENST00000350697 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
SEC13-202ENST00000350697 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
SEC13-202ENST00000350697 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
SEC13-202ENST00000350697 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
SEC13-202ENST00000350697 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SEC13-202ENST00000350697 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
SEC13-202ENST00000350697 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
SEC13-202ENST00000350697 MT4P47944 62 aa4.46□□□□□ -1.7
SEC13-202ENST00000350697 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
SEC13-202ENST00000350697 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
SEC13-202ENST00000350697 H3BS24 57 aa4.42□□□□□ -1.7
SEC13-202ENST00000350697 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
SEC13-202ENST00000350697 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
SEC13-202ENST00000350697 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
SEC13-202ENST00000350697 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
SEC13-202ENST00000350697 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
SEC13-202ENST00000350697 MT1AP04731 61 aa4.25□□□□□ -1.73
SEC13-202ENST00000350697 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
SEC13-202ENST00000350697 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
SEC13-202ENST00000350697 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
SEC13-202ENST00000350697 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
SEC13-202ENST00000350697 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
SEC13-202ENST00000350697 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
SEC13-202ENST00000350697 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
SEC13-202ENST00000350697 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
SEC13-202ENST00000350697 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
SEC13-202ENST00000350697 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
SEC13-202ENST00000350697 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
SEC13-202ENST00000350697 MT3P25713 68 aa3.87□□□□□ -1.79
SEC13-202ENST00000350697 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
SEC13-202ENST00000350697 INE1O15225 51 aa3.78□□□□□ -1.8
SEC13-202ENST00000350697 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
SEC13-202ENST00000350697 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SEC13-202ENST00000350697 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SEC13-202ENST00000350697 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
SEC13-202ENST00000350697 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
SEC13-202ENST00000350697 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
SEC13-202ENST00000350697 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SEC13-202ENST00000350697 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SEC13-202ENST00000350697 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
SEC13-202ENST00000350697 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SEC13-202ENST00000350697 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
SEC13-202ENST00000350697 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
SEC13-202ENST00000350697 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SEC13-202ENST00000350697 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
SEC13-202ENST00000350697 PRM1P04553 51 aa2.93□□□□□ -1.94
SEC13-202ENST00000350697 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SEC13-202ENST00000350697 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
SEC13-202ENST00000350697 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
SEC13-202ENST00000350697 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SEC13-202ENST00000350697 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SEC13-202ENST00000350697 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
SEC13-202ENST00000350697 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SEC13-202ENST00000350697 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SEC13-202ENST00000350697 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 51.3 ms