RNA–Protein interactions for RNA: ENST00000348405.8

SEC31A-203, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC31A, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-203ENST00000348405 KRTAP4-9Q9BYQ8 210 aa1.82□□□□□ -2.12
SEC31A-203ENST00000348405 NEBP20929 6669 aa1.81□□□□□ -2.12
SEC31A-203ENST00000348405 INE1O15225 51 aa1.81□□□□□ -2.12
SEC31A-203ENST00000348405 MT1BP07438 61 aa1.8□□□□□ -2.12
SEC31A-203ENST00000348405 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
SEC31A-203ENST00000348405 KRTAP9-3Q9BYQ3 159 aa1.79□□□□□ -2.12
SEC31A-203ENST00000348405 TNP1P09430 55 aa1.79□□□□□ -2.12
SEC31A-203ENST00000348405 LCE3AQ5TA76 89 aa1.78□□□□□ -2.12
SEC31A-203ENST00000348405 MT1XP80297 61 aa1.77□□□□□ -2.13
SEC31A-203ENST00000348405 KRTAP10-5P60370 271 aa1.76□□□□□ -2.13
SEC31A-203ENST00000348405 KRTAP10-7P60409 375 aaPredicted RBP1.76□□□□□ -2.13
SEC31A-203ENST00000348405 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
SEC31A-203ENST00000348405 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
SEC31A-203ENST00000348405 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
SEC31A-203ENST00000348405 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
SEC31A-203ENST00000348405 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
SEC31A-203ENST00000348405 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
SEC31A-203ENST00000348405 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
SEC31A-203ENST00000348405 KRTAP10-12P60413 245 aa1.7□□□□□ -2.14
SEC31A-203ENST00000348405 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SEC31A-203ENST00000348405 LCE3CQ5T5A8 94 aa1.69□□□□□ -2.14
SEC31A-203ENST00000348405 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
SEC31A-203ENST00000348405 SYNE2Q8WXH0 6885 aaKnown RBP1.68□□□□□ -2.14
SEC31A-203ENST00000348405 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
SEC31A-203ENST00000348405 MACF1Q9UPN3 7388 aaKnown RBP1.66□□□□□ -2.14
SEC31A-203ENST00000348405 KRTAP12-3P60328 96 aa1.66□□□□□ -2.14
SEC31A-203ENST00000348405 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
SEC31A-203ENST00000348405 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.14
SEC31A-203ENST00000348405 KRTAP5-3Q6L8H2 238 aa1.62□□□□□ -2.15
SEC31A-203ENST00000348405 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
SEC31A-203ENST00000348405 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
SEC31A-203ENST00000348405 LCE1AQ5T7P2 110 aa1.58□□□□□ -2.16
SEC31A-203ENST00000348405 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
SEC31A-203ENST00000348405 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
SEC31A-203ENST00000348405 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
SEC31A-203ENST00000348405 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
SEC31A-203ENST00000348405 KRTAP9-6A8MVA2 160 aa1.55□□□□□ -2.16
SEC31A-203ENST00000348405 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
SEC31A-203ENST00000348405 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
SEC31A-203ENST00000348405 MT1EP04732 61 aa1.52□□□□□ -2.17
SEC31A-203ENST00000348405 MT1LQ93083 61 aa1.51□□□□□ -2.17
SEC31A-203ENST00000348405 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
SEC31A-203ENST00000348405 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
SEC31A-203ENST00000348405 MT1GP13640 62 aa1.49□□□□□ -2.17
SEC31A-203ENST00000348405 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
SEC31A-203ENST00000348405 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
SEC31A-203ENST00000348405 LCE3DQ9BYE3 92 aa1.46□□□□□ -2.18
SEC31A-203ENST00000348405 KRTAP5-9P26371 169 aa1.44□□□□□ -2.18
SEC31A-203ENST00000348405 MT1MQ8N339 61 aa1.43□□□□□ -2.18
SEC31A-203ENST00000348405 KRTAP19-3Q7Z4W3 81 aa1.43□□□□□ -2.18
SEC31A-203ENST00000348405 MT3P25713 68 aa1.39□□□□□ -2.19
SEC31A-203ENST00000348405 SPRR2EP22531 72 aa1.37□□□□□ -2.19
SEC31A-203ENST00000348405 SPRR2BP35325 72 aa1.37□□□□□ -2.19
SEC31A-203ENST00000348405 SPRR2AP35326 72 aa1.37□□□□□ -2.19
SEC31A-203ENST00000348405 SPRR2DP22532 72 aa1.37□□□□□ -2.19
SEC31A-203ENST00000348405 KRTAP6-1Q3LI64 71 aa1.32□□□□□ -2.2
SEC31A-203ENST00000348405 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
SEC31A-203ENST00000348405 MT1AP04731 61 aa1.31□□□□□ -2.2
SEC31A-203ENST00000348405 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
SEC31A-203ENST00000348405 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
SEC31A-203ENST00000348405 MT4P47944 62 aa1.23□□□□□ -2.21
SEC31A-203ENST00000348405 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
SEC31A-203ENST00000348405 KRTAP5-4Q6L8H1 288 aa1.22□□□□□ -2.21
SEC31A-203ENST00000348405 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
SEC31A-203ENST00000348405 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
SEC31A-203ENST00000348405 PRM1P04553 51 aa1.12□□□□□ -2.23
SEC31A-203ENST00000348405 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
SEC31A-203ENST00000348405 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.23
SEC31A-203ENST00000348405 KRTAP5-2Q701N4 177 aa1.06□□□□□ -2.24
SEC31A-203ENST00000348405 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
SEC31A-203ENST00000348405 KRTAP4-4Q9BYR3 166 aa1.02□□□□□ -2.25
SEC31A-203ENST00000348405 KRTAP5-8O75690 187 aa1.01□□□□□ -2.25
SEC31A-203ENST00000348405 LCE1CQ5T751 118 aa0.97□□□□□ -2.25
SEC31A-203ENST00000348405 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
SEC31A-203ENST00000348405 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
SEC31A-203ENST00000348405 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
SEC31A-203ENST00000348405 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 210.7 ms