RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
TNFSF13-201ENST00000338784 NEBP20929 6669 aa5.5□□□□□ -1.53
TNFSF13-201ENST00000338784 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
TNFSF13-201ENST00000338784 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.55
TNFSF13-201ENST00000338784 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
TNFSF13-201ENST00000338784 KRTAP20-1Q3LI63 56 aa5.29□□□□□ -1.56
TNFSF13-201ENST00000338784 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
TNFSF13-201ENST00000338784 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
TNFSF13-201ENST00000338784 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
TNFSF13-201ENST00000338784 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
TNFSF13-201ENST00000338784 MT1EP04732 61 aa5.25□□□□□ -1.57
TNFSF13-201ENST00000338784 MT1LQ93083 61 aa5.24□□□□□ -1.57
TNFSF13-201ENST00000338784 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
TNFSF13-201ENST00000338784 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
TNFSF13-201ENST00000338784 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.58
TNFSF13-201ENST00000338784 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
TNFSF13-201ENST00000338784 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
TNFSF13-201ENST00000338784 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
TNFSF13-201ENST00000338784 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
TNFSF13-201ENST00000338784 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
TNFSF13-201ENST00000338784 SPRR2EP22531 72 aa4.98□□□□□ -1.61
TNFSF13-201ENST00000338784 SPRR2BP35325 72 aa4.98□□□□□ -1.61
TNFSF13-201ENST00000338784 SPRR2AP35326 72 aa4.98□□□□□ -1.61
TNFSF13-201ENST00000338784 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
TNFSF13-201ENST00000338784 MT1GP13640 62 aa4.93□□□□□ -1.62
TNFSF13-201ENST00000338784 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
TNFSF13-201ENST00000338784 MT1MQ8N339 61 aa4.91□□□□□ -1.62
TNFSF13-201ENST00000338784 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
TNFSF13-201ENST00000338784 SPRR2DP22532 72 aa4.83□□□□□ -1.64
TNFSF13-201ENST00000338784 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
TNFSF13-201ENST00000338784 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
TNFSF13-201ENST00000338784 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
TNFSF13-201ENST00000338784 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
TNFSF13-201ENST00000338784 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
TNFSF13-201ENST00000338784 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
TNFSF13-201ENST00000338784 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
TNFSF13-201ENST00000338784 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
TNFSF13-201ENST00000338784 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
TNFSF13-201ENST00000338784 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
TNFSF13-201ENST00000338784 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
TNFSF13-201ENST00000338784 MT1AP04731 61 aa4.41□□□□□ -1.7
TNFSF13-201ENST00000338784 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
TNFSF13-201ENST00000338784 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
TNFSF13-201ENST00000338784 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
TNFSF13-201ENST00000338784 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
TNFSF13-201ENST00000338784 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
TNFSF13-201ENST00000338784 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
TNFSF13-201ENST00000338784 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
TNFSF13-201ENST00000338784 MT4P47944 62 aa4.23□□□□□ -1.73
TNFSF13-201ENST00000338784 MT3P25713 68 aa4.2□□□□□ -1.74
TNFSF13-201ENST00000338784 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
TNFSF13-201ENST00000338784 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
TNFSF13-201ENST00000338784 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
TNFSF13-201ENST00000338784 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
TNFSF13-201ENST00000338784 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
TNFSF13-201ENST00000338784 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
TNFSF13-201ENST00000338784 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
TNFSF13-201ENST00000338784 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
TNFSF13-201ENST00000338784 PRM1P04553 51 aa3.95□□□□□ -1.78
TNFSF13-201ENST00000338784 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
TNFSF13-201ENST00000338784 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
TNFSF13-201ENST00000338784 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
TNFSF13-201ENST00000338784 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
TNFSF13-201ENST00000338784 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
TNFSF13-201ENST00000338784 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
TNFSF13-201ENST00000338784 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
TNFSF13-201ENST00000338784 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
TNFSF13-201ENST00000338784 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
TNFSF13-201ENST00000338784 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
TNFSF13-201ENST00000338784 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
TNFSF13-201ENST00000338784 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
TNFSF13-201ENST00000338784 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
TNFSF13-201ENST00000338784 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
TNFSF13-201ENST00000338784 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
TNFSF13-201ENST00000338784 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
TNFSF13-201ENST00000338784 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
TNFSF13-201ENST00000338784 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 172.5 ms