RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 KRTAP4-7Q9BYR0 210 aa2.17□□□□□ -2.06
PBRM1-202ENST00000337303 MT1EP04732 61 aa2.16□□□□□ -2.06
PBRM1-202ENST00000337303 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
PBRM1-202ENST00000337303 KRTAP9-6A0A140TA67 174 aa2.11□□□□□ -2.07
PBRM1-202ENST00000337303 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
PBRM1-202ENST00000337303 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
PBRM1-202ENST00000337303 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
PBRM1-202ENST00000337303 PRM1P04553 51 aa2.09□□□□□ -2.07
PBRM1-202ENST00000337303 MT1MQ8N339 61 aa2.09□□□□□ -2.07
PBRM1-202ENST00000337303 KRTAP9-2Q9BYQ4 174 aa2.09□□□□□ -2.07
PBRM1-202ENST00000337303 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.07
PBRM1-202ENST00000337303 MT3P25713 68 aa2.08□□□□□ -2.08
PBRM1-202ENST00000337303 MUC2Q02817 5179 aa2.05□□□□□ -2.08
PBRM1-202ENST00000337303 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
PBRM1-202ENST00000337303 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
PBRM1-202ENST00000337303 DSTQ03001 7570 aaKnown RBP2.02□□□□□ -2.09
PBRM1-202ENST00000337303 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
PBRM1-202ENST00000337303 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
PBRM1-202ENST00000337303 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
PBRM1-202ENST00000337303 LOC100996750A0A140TA64 210 aa2.02□□□□□ -2.09
PBRM1-202ENST00000337303 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
PBRM1-202ENST00000337303 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
PBRM1-202ENST00000337303 KRTAP19-6Q3LI70 58 aa2□□□□□ -2.09
PBRM1-202ENST00000337303 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
PBRM1-202ENST00000337303 MT1AP04731 61 aa1.98□□□□□ -2.09
PBRM1-202ENST00000337303 RNF213Q63HN8 5207 aa1.95□□□□□ -2.1
PBRM1-202ENST00000337303 KRTAP4-6Q9BYQ5 205 aa1.94□□□□□ -2.1
PBRM1-202ENST00000337303 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
PBRM1-202ENST00000337303 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
PBRM1-202ENST00000337303 MT4P47944 62 aa1.93□□□□□ -2.1
PBRM1-202ENST00000337303 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
PBRM1-202ENST00000337303 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
PBRM1-202ENST00000337303 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
PBRM1-202ENST00000337303 KMT2DO14686 5537 aa1.9□□□□□ -2.11
PBRM1-202ENST00000337303 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
PBRM1-202ENST00000337303 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.88□□□□□ -2.11
PBRM1-202ENST00000337303 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
PBRM1-202ENST00000337303 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.11
PBRM1-202ENST00000337303 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.11
PBRM1-202ENST00000337303 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
PBRM1-202ENST00000337303 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
PBRM1-202ENST00000337303 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
PBRM1-202ENST00000337303 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
PBRM1-202ENST00000337303 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
PBRM1-202ENST00000337303 USH2AO75445 5202 aa1.75□□□□□ -2.13
PBRM1-202ENST00000337303 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
PBRM1-202ENST00000337303 KRTAP2-2Q9BYT5 123 aa1.71□□□□□ -2.13
PBRM1-202ENST00000337303 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
PBRM1-202ENST00000337303 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PBRM1-202ENST00000337303 NEBP20929 6669 aa1.64□□□□□ -2.15
PBRM1-202ENST00000337303 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
PBRM1-202ENST00000337303 LCE1EQ5T753 118 aa1.61□□□□□ -2.15
PBRM1-202ENST00000337303 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
PBRM1-202ENST00000337303 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
PBRM1-202ENST00000337303 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
PBRM1-202ENST00000337303 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
PBRM1-202ENST00000337303 KRTAP4-11Q9BYQ6 195 aa1.52□□□□□ -2.17
PBRM1-202ENST00000337303 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
PBRM1-202ENST00000337303 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
PBRM1-202ENST00000337303 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
PBRM1-202ENST00000337303 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
PBRM1-202ENST00000337303 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
PBRM1-202ENST00000337303 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
PBRM1-202ENST00000337303 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
PBRM1-202ENST00000337303 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
PBRM1-202ENST00000337303 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.21
PBRM1-202ENST00000337303 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
PBRM1-202ENST00000337303 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.22
PBRM1-202ENST00000337303 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
PBRM1-202ENST00000337303 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
PBRM1-202ENST00000337303 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
PBRM1-202ENST00000337303 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
PBRM1-202ENST00000337303 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
PBRM1-202ENST00000337303 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
PBRM1-202ENST00000337303 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
PBRM1-202ENST00000337303 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
PBRM1-202ENST00000337303 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 7.6 ms