RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
FGFR1-202ENST00000335922 SPRR2DP22532 72 aa5.01□□□□□ -1.61
FGFR1-202ENST00000335922 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
FGFR1-202ENST00000335922 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
FGFR1-202ENST00000335922 MT1GP13640 62 aa4.98□□□□□ -1.61
FGFR1-202ENST00000335922 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
FGFR1-202ENST00000335922 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
FGFR1-202ENST00000335922 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
FGFR1-202ENST00000335922 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
FGFR1-202ENST00000335922 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
FGFR1-202ENST00000335922 MT1EP04732 61 aa4.86□□□□□ -1.63
FGFR1-202ENST00000335922 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
FGFR1-202ENST00000335922 MT1LQ93083 61 aa4.85□□□□□ -1.63
FGFR1-202ENST00000335922 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
FGFR1-202ENST00000335922 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
FGFR1-202ENST00000335922 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
FGFR1-202ENST00000335922 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
FGFR1-202ENST00000335922 MT1MQ8N339 61 aa4.68□□□□□ -1.66
FGFR1-202ENST00000335922 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
FGFR1-202ENST00000335922 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
FGFR1-202ENST00000335922 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
FGFR1-202ENST00000335922 SSPOA2VEC9 5147 aa4.59□□□□□ -1.67
FGFR1-202ENST00000335922 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
FGFR1-202ENST00000335922 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
FGFR1-202ENST00000335922 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
FGFR1-202ENST00000335922 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
FGFR1-202ENST00000335922 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
FGFR1-202ENST00000335922 MT4P47944 62 aa4.56□□□□□ -1.68
FGFR1-202ENST00000335922 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
FGFR1-202ENST00000335922 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
FGFR1-202ENST00000335922 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
FGFR1-202ENST00000335922 PRM1P04553 51 aa4.37□□□□□ -1.71
FGFR1-202ENST00000335922 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
FGFR1-202ENST00000335922 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
FGFR1-202ENST00000335922 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
FGFR1-202ENST00000335922 MT3P25713 68 aa4.22□□□□□ -1.73
FGFR1-202ENST00000335922 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
FGFR1-202ENST00000335922 MT1AP04731 61 aa4.19□□□□□ -1.74
FGFR1-202ENST00000335922 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
FGFR1-202ENST00000335922 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
FGFR1-202ENST00000335922 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
FGFR1-202ENST00000335922 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
FGFR1-202ENST00000335922 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
FGFR1-202ENST00000335922 NEBP20929 6669 aa4.04□□□□□ -1.76
FGFR1-202ENST00000335922 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
FGFR1-202ENST00000335922 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
FGFR1-202ENST00000335922 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
FGFR1-202ENST00000335922 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
FGFR1-202ENST00000335922 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
FGFR1-202ENST00000335922 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
FGFR1-202ENST00000335922 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
FGFR1-202ENST00000335922 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
FGFR1-202ENST00000335922 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
FGFR1-202ENST00000335922 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
FGFR1-202ENST00000335922 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
FGFR1-202ENST00000335922 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
FGFR1-202ENST00000335922 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
FGFR1-202ENST00000335922 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
FGFR1-202ENST00000335922 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
FGFR1-202ENST00000335922 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
FGFR1-202ENST00000335922 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
FGFR1-202ENST00000335922 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
FGFR1-202ENST00000335922 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
FGFR1-202ENST00000335922 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
FGFR1-202ENST00000335922 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
FGFR1-202ENST00000335922 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
FGFR1-202ENST00000335922 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
FGFR1-202ENST00000335922 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
FGFR1-202ENST00000335922 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
FGFR1-202ENST00000335922 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
FGFR1-202ENST00000335922 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
FGFR1-202ENST00000335922 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
FGFR1-202ENST00000335922 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
FGFR1-202ENST00000335922 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
FGFR1-202ENST00000335922 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
FGFR1-202ENST00000335922 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
FGFR1-202ENST00000335922 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms