RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 LINC00158P58513 81 aa0.61□□□□□ -2.31
LINC00643-201ENST00000334389 KRTAP25-1Q3LHN0 102 aa0.61□□□□□ -2.31
LINC00643-201ENST00000334389 Q5W150 140 aa0.61□□□□□ -2.31
LINC00643-201ENST00000334389 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 DNAL4O96015 105 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 UBL5Q9BZL1 73 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 M0R2T5 61 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 TTTY13Q9BZ97 58 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 MMP24-AS1A0A0U1RRL7 71 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 A0A1B0GU33 70 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 P0C880 135 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 CASC2Q6XLA1 102 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 LINC00208Q96KT6 92 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 H0Y9P7 68 aa0.59□□□□□ -2.31
LINC00643-201ENST00000334389 UQCR11O14957 56 aa0.59□□□□□ -2.31
LINC00643-201ENST00000334389 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
LINC00643-201ENST00000334389 IGKV2-24A0A0C4DH68 120 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 KRTAP12-4P60329 112 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 RBM3P98179 157 aaKnown RBP0.59□□□□□ -2.32
LINC00643-201ENST00000334389 C20orf197Q8N268 126 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 C8orf17Q9NRJ1 99 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 DEFB116Q30KQ4 102 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 MRPL34Q9BQ48 92 aaKnown RBP0.59□□□□□ -2.32
LINC00643-201ENST00000334389 MUC19Q7Z5P9 8384 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 A0A087WVE0 104 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 NCR3O14931 201 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 PRLHP81277 87 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 COA5Q86WW8 74 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 SELENOKQ9Y6D0 94 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 IGKV3D-7A0A0C4DH55 119 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 INE1O15225 51 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 CAMK2N1Q7Z7J9 78 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 BRK1Q8WUW1 75 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 TOMM7Q9P0U1 55 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 MT1LQ93083 61 aa0.57□□□□□ -2.32
LINC00643-201ENST00000334389 A0A0A0MQY5 61 aa0.57□□□□□ -2.32
LINC00643-201ENST00000334389 MT1AP04731 61 aa0.56□□□□□ -2.32
LINC00643-201ENST00000334389 SPINK7P58062 85 aa0.56□□□□□ -2.32
LINC00643-201ENST00000334389 PRR15LQ9BU68 103 aa0.56□□□□□ -2.32
LINC00643-201ENST00000334389 A8MU10 97 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 M0QZ58 72 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 SPTSSBQ8NFR3 76 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 IGLV9-49A0A0B4J1Y8 123 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 ACYP2P14621 99 aa0.54□□□□□ -2.32
LINC00643-201ENST00000334389 SNURFQ9Y675 71 aa0.54□□□□□ -2.32
LINC00643-201ENST00000334389 CSAG1Q6PB30 78 aa0.53□□□□□ -2.32
LINC00643-201ENST00000334389 S4R3F8 94 aa0.53□□□□□ -2.32
LINC00643-201ENST00000334389 CHKB-CPT1BH3BT56 60 aa0.53□□□□□ -2.33
LINC00643-201ENST00000334389 MIR22HGQ0VDD5 57 aa0.53□□□□□ -2.33
LINC00643-201ENST00000334389 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
LINC00643-201ENST00000334389 Q8N9L7 120 aa0.52□□□□□ -2.33
LINC00643-201ENST00000334389 HAMPP81172 84 aa0.51□□□□□ -2.33
LINC00643-201ENST00000334389 A6NED7 52 aa0.51□□□□□ -2.33
LINC00643-201ENST00000334389 ADM2Q7Z4H4 148 aa0.51□□□□□ -2.33
LINC00643-201ENST00000334389 K7ERS5 55 aa0.5□□□□□ -2.33
LINC00643-201ENST00000334389 LCE3CQ5T5A8 94 aa0.5□□□□□ -2.33
LINC00643-201ENST00000334389 DEFB105AQ8NG35 78 aa0.49□□□□□ -2.33
LINC00643-201ENST00000334389 PRAC1Q96KF2 57 aa0.49□□□□□ -2.33
LINC00643-201ENST00000334389 A0A1B0GU69 56 aa0.48□□□□□ -2.33
LINC00643-201ENST00000334389 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
LINC00643-201ENST00000334389 KRTAP12-1P59990 96 aa0.48□□□□□ -2.33
LINC00643-201ENST00000334389 KRTAP13-4Q3LI77 160 aa0.47□□□□□ -2.33
LINC00643-201ENST00000334389 LUZP6Q538Z0 58 aa0.47□□□□□ -2.33
LINC00643-201ENST00000334389 TNP1P09430 55 aa0.45□□□□□ -2.34
LINC00643-201ENST00000334389 SPINT4Q6UDR6 99 aa0.45□□□□□ -2.34
LINC00643-201ENST00000334389 LCE3EQ5T5B0 92 aa0.44□□□□□ -2.34
LINC00643-201ENST00000334389 NDUFAF8A1L188 74 aa0.43□□□□□ -2.34
LINC00643-201ENST00000334389 R4GN34 69 aa0.43□□□□□ -2.34
LINC00643-201ENST00000334389 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
LINC00643-201ENST00000334389 KRTAP12-3P60328 96 aa0.39□□□□□ -2.35
LINC00643-201ENST00000334389 A0A0D9SG42 100 aa0.36□□□□□ -2.35
LINC00643-201ENST00000334389 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
LINC00643-201ENST00000334389 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
LINC00643-201ENST00000334389 LCE3DQ9BYE3 92 aa0.31□□□□□ -2.36
LINC00643-201ENST00000334389 PRM1P04553 51 aa0.22□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms