RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 SPRR2EP22531 72 aa3.23□□□□□ -1.89
SS18L1-201ENST00000331758 SPRR2BP35325 72 aa3.23□□□□□ -1.89
SS18L1-201ENST00000331758 SPRR2AP35326 72 aa3.23□□□□□ -1.89
SS18L1-201ENST00000331758 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
SS18L1-201ENST00000331758 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
SS18L1-201ENST00000331758 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
SS18L1-201ENST00000331758 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
SS18L1-201ENST00000331758 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SS18L1-201ENST00000331758 KMT2DO14686 5537 aa3.16□□□□□ -1.9
SS18L1-201ENST00000331758 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
SS18L1-201ENST00000331758 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
SS18L1-201ENST00000331758 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
SS18L1-201ENST00000331758 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
SS18L1-201ENST00000331758 SPRR2DP22532 72 aa3.11□□□□□ -1.91
SS18L1-201ENST00000331758 MT1MQ8N339 61 aa3.1□□□□□ -1.91
SS18L1-201ENST00000331758 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
SS18L1-201ENST00000331758 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
SS18L1-201ENST00000331758 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
SS18L1-201ENST00000331758 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
SS18L1-201ENST00000331758 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
SS18L1-201ENST00000331758 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
SS18L1-201ENST00000331758 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
SS18L1-201ENST00000331758 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
SS18L1-201ENST00000331758 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
SS18L1-201ENST00000331758 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
SS18L1-201ENST00000331758 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
SS18L1-201ENST00000331758 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
SS18L1-201ENST00000331758 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
SS18L1-201ENST00000331758 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SS18L1-201ENST00000331758 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
SS18L1-201ENST00000331758 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
SS18L1-201ENST00000331758 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
SS18L1-201ENST00000331758 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
SS18L1-201ENST00000331758 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.96
SS18L1-201ENST00000331758 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
SS18L1-201ENST00000331758 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
SS18L1-201ENST00000331758 MT1AP04731 61 aa2.8□□□□□ -1.96
SS18L1-201ENST00000331758 MT4P47944 62 aa2.8□□□□□ -1.96
SS18L1-201ENST00000331758 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
SS18L1-201ENST00000331758 MT3P25713 68 aa2.75□□□□□ -1.97
SS18L1-201ENST00000331758 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
SS18L1-201ENST00000331758 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
SS18L1-201ENST00000331758 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
SS18L1-201ENST00000331758 PRM1P04553 51 aa2.68□□□□□ -1.98
SS18L1-201ENST00000331758 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
SS18L1-201ENST00000331758 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
SS18L1-201ENST00000331758 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
SS18L1-201ENST00000331758 LCE1DQ5T752 114 aa2.56□□□□□ -2
SS18L1-201ENST00000331758 LCE1EQ5T753 118 aa2.55□□□□□ -2
SS18L1-201ENST00000331758 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SS18L1-201ENST00000331758 NEBP20929 6669 aa2.5□□□□□ -2.01
SS18L1-201ENST00000331758 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SS18L1-201ENST00000331758 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SS18L1-201ENST00000331758 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SS18L1-201ENST00000331758 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
SS18L1-201ENST00000331758 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
SS18L1-201ENST00000331758 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
SS18L1-201ENST00000331758 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
SS18L1-201ENST00000331758 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.06
SS18L1-201ENST00000331758 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
SS18L1-201ENST00000331758 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
SS18L1-201ENST00000331758 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
SS18L1-201ENST00000331758 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
SS18L1-201ENST00000331758 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
SS18L1-201ENST00000331758 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
SS18L1-201ENST00000331758 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
SS18L1-201ENST00000331758 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.1
SS18L1-201ENST00000331758 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
SS18L1-201ENST00000331758 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
SS18L1-201ENST00000331758 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
SS18L1-201ENST00000331758 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
SS18L1-201ENST00000331758 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
SS18L1-201ENST00000331758 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
SS18L1-201ENST00000331758 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
SS18L1-201ENST00000331758 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SS18L1-201ENST00000331758 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SS18L1-201ENST00000331758 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 62.4 ms