RNA–Protein interactions for RNA: ENST00000331029.11

EWSR1-201, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5 BASIC

Gene EWSR1, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-201ENST00000331029 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
EWSR1-201ENST00000331029 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
EWSR1-201ENST00000331029 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.5
EWSR1-201ENST00000331029 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
EWSR1-201ENST00000331029 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
EWSR1-201ENST00000331029 SPRR2FQ96RM1 72 aa5.53□□□□□ -1.52
EWSR1-201ENST00000331029 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
EWSR1-201ENST00000331029 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.53
EWSR1-201ENST00000331029 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
EWSR1-201ENST00000331029 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
EWSR1-201ENST00000331029 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
EWSR1-201ENST00000331029 MT1GP13640 62 aa5.44□□□□□ -1.54
EWSR1-201ENST00000331029 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
EWSR1-201ENST00000331029 MT1MQ8N339 61 aa5.43□□□□□ -1.54
EWSR1-201ENST00000331029 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
EWSR1-201ENST00000331029 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
EWSR1-201ENST00000331029 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
EWSR1-201ENST00000331029 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
EWSR1-201ENST00000331029 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
EWSR1-201ENST00000331029 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
EWSR1-201ENST00000331029 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
EWSR1-201ENST00000331029 SPRR2EP22531 72 aa5.23□□□□□ -1.57
EWSR1-201ENST00000331029 SPRR2BP35325 72 aa5.23□□□□□ -1.57
EWSR1-201ENST00000331029 SPRR2AP35326 72 aa5.23□□□□□ -1.57
EWSR1-201ENST00000331029 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
EWSR1-201ENST00000331029 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
EWSR1-201ENST00000331029 SPRR2DP22532 72 aa5.04□□□□□ -1.6
EWSR1-201ENST00000331029 NEBP20929 6669 aa4.99□□□□□ -1.61
EWSR1-201ENST00000331029 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
EWSR1-201ENST00000331029 MT1AP04731 61 aa4.86□□□□□ -1.63
EWSR1-201ENST00000331029 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
EWSR1-201ENST00000331029 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
EWSR1-201ENST00000331029 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
EWSR1-201ENST00000331029 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
EWSR1-201ENST00000331029 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.65
EWSR1-201ENST00000331029 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
EWSR1-201ENST00000331029 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
EWSR1-201ENST00000331029 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
EWSR1-201ENST00000331029 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
EWSR1-201ENST00000331029 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
EWSR1-201ENST00000331029 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
EWSR1-201ENST00000331029 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
EWSR1-201ENST00000331029 MT4P47944 62 aa4.4□□□□□ -1.71
EWSR1-201ENST00000331029 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
EWSR1-201ENST00000331029 MT3P25713 68 aa4.37□□□□□ -1.71
EWSR1-201ENST00000331029 PRM1P04553 51 aa4.36□□□□□ -1.71
EWSR1-201ENST00000331029 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
EWSR1-201ENST00000331029 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
EWSR1-201ENST00000331029 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
EWSR1-201ENST00000331029 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
EWSR1-201ENST00000331029 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
EWSR1-201ENST00000331029 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
EWSR1-201ENST00000331029 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
EWSR1-201ENST00000331029 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
EWSR1-201ENST00000331029 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
EWSR1-201ENST00000331029 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
EWSR1-201ENST00000331029 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
EWSR1-201ENST00000331029 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
EWSR1-201ENST00000331029 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
EWSR1-201ENST00000331029 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
EWSR1-201ENST00000331029 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
EWSR1-201ENST00000331029 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
EWSR1-201ENST00000331029 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
EWSR1-201ENST00000331029 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
EWSR1-201ENST00000331029 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
EWSR1-201ENST00000331029 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
EWSR1-201ENST00000331029 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
EWSR1-201ENST00000331029 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
EWSR1-201ENST00000331029 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
EWSR1-201ENST00000331029 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
EWSR1-201ENST00000331029 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
EWSR1-201ENST00000331029 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
EWSR1-201ENST00000331029 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
EWSR1-201ENST00000331029 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
EWSR1-201ENST00000331029 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
EWSR1-201ENST00000331029 PHGR1C9JFL3 82 aa2.57□□□□□ -2
EWSR1-201ENST00000331029 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms