RNA–Protein interactions for RNA: ENST00000324767.11

SCAPER-202, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAPER, Length 4,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-202ENST00000324767 MT1MQ8N339 61 aa2.53□□□□□ -2
SCAPER-202ENST00000324767 LCE3BQ5TA77 95 aa2.52□□□□□ -2.01
SCAPER-202ENST00000324767 KRTAP9-6A0A140TA67 174 aa2.51□□□□□ -2.01
SCAPER-202ENST00000324767 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
SCAPER-202ENST00000324767 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
SCAPER-202ENST00000324767 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SCAPER-202ENST00000324767 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
SCAPER-202ENST00000324767 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
SCAPER-202ENST00000324767 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SCAPER-202ENST00000324767 MT3P25713 68 aa2.41□□□□□ -2.02
SCAPER-202ENST00000324767 MT1AP04731 61 aa2.37□□□□□ -2.03
SCAPER-202ENST00000324767 KRTAP9-7A8MTY7 169 aa2.35□□□□□ -2.03
SCAPER-202ENST00000324767 LCE5AQ5TCM9 118 aa2.33□□□□□ -2.04
SCAPER-202ENST00000324767 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.33□□□□□ -2.04
SCAPER-202ENST00000324767 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
SCAPER-202ENST00000324767 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
SCAPER-202ENST00000324767 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
SCAPER-202ENST00000324767 LOC100996750A0A140TA64 210 aa2.29□□□□□ -2.04
SCAPER-202ENST00000324767 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
SCAPER-202ENST00000324767 KRTAP2-4Q9BYR9 128 aa2.29□□□□□ -2.04
SCAPER-202ENST00000324767 MT4P47944 62 aa2.28□□□□□ -2.04
SCAPER-202ENST00000324767 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SCAPER-202ENST00000324767 MUC2Q02817 5179 aa2.28□□□□□ -2.04
SCAPER-202ENST00000324767 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
SCAPER-202ENST00000324767 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
SCAPER-202ENST00000324767 KRTAP9-4Q9BYQ2 154 aa2.25□□□□□ -2.05
SCAPER-202ENST00000324767 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
SCAPER-202ENST00000324767 USH2AO75445 5202 aa2.22□□□□□ -2.05
SCAPER-202ENST00000324767 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
SCAPER-202ENST00000324767 KRTAP4-6Q9BYQ5 205 aa2.18□□□□□ -2.06
SCAPER-202ENST00000324767 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
SCAPER-202ENST00000324767 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.06
SCAPER-202ENST00000324767 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.07
SCAPER-202ENST00000324767 LCE1DQ5T752 114 aa2.12□□□□□ -2.07
SCAPER-202ENST00000324767 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
SCAPER-202ENST00000324767 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
SCAPER-202ENST00000324767 PRM1P04553 51 aa2.09□□□□□ -2.08
SCAPER-202ENST00000324767 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.08
SCAPER-202ENST00000324767 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
SCAPER-202ENST00000324767 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
SCAPER-202ENST00000324767 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SCAPER-202ENST00000324767 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
SCAPER-202ENST00000324767 KRTAP4-9Q9BYQ8 210 aa2.04□□□□□ -2.08
SCAPER-202ENST00000324767 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
SCAPER-202ENST00000324767 NEBP20929 6669 aa1.96□□□□□ -2.1
SCAPER-202ENST00000324767 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
SCAPER-202ENST00000324767 KMT2DO14686 5537 aa1.94□□□□□ -2.1
SCAPER-202ENST00000324767 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
SCAPER-202ENST00000324767 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
SCAPER-202ENST00000324767 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
SCAPER-202ENST00000324767 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
SCAPER-202ENST00000324767 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
SCAPER-202ENST00000324767 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
SCAPER-202ENST00000324767 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
SCAPER-202ENST00000324767 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
SCAPER-202ENST00000324767 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
SCAPER-202ENST00000324767 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
SCAPER-202ENST00000324767 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
SCAPER-202ENST00000324767 KRTAP5-3Q6L8H2 238 aa1.61□□□□□ -2.15
SCAPER-202ENST00000324767 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
SCAPER-202ENST00000324767 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SCAPER-202ENST00000324767 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
SCAPER-202ENST00000324767 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
SCAPER-202ENST00000324767 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
SCAPER-202ENST00000324767 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
SCAPER-202ENST00000324767 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.18
SCAPER-202ENST00000324767 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
SCAPER-202ENST00000324767 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
SCAPER-202ENST00000324767 KRTAP5-1Q6L8H4 278 aa1.32□□□□□ -2.2
SCAPER-202ENST00000324767 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
SCAPER-202ENST00000324767 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
SCAPER-202ENST00000324767 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
SCAPER-202ENST00000324767 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
SCAPER-202ENST00000324767 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
SCAPER-202ENST00000324767 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
SCAPER-202ENST00000324767 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
SCAPER-202ENST00000324767 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 129.6 ms