RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
CALR-201ENST00000316448 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
CALR-201ENST00000316448 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
CALR-201ENST00000316448 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
CALR-201ENST00000316448 H3BS24 57 aa5.46□□□□□ -1.54
CALR-201ENST00000316448 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
CALR-201ENST00000316448 MT1GP13640 62 aa5.39□□□□□ -1.55
CALR-201ENST00000316448 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
CALR-201ENST00000316448 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
CALR-201ENST00000316448 MT1MQ8N339 61 aa5.37□□□□□ -1.55
CALR-201ENST00000316448 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
CALR-201ENST00000316448 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
CALR-201ENST00000316448 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
CALR-201ENST00000316448 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
CALR-201ENST00000316448 SPRR2EP22531 72 aa5.27□□□□□ -1.57
CALR-201ENST00000316448 SPRR2BP35325 72 aa5.27□□□□□ -1.57
CALR-201ENST00000316448 SPRR2AP35326 72 aa5.27□□□□□ -1.57
CALR-201ENST00000316448 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
CALR-201ENST00000316448 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
CALR-201ENST00000316448 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
CALR-201ENST00000316448 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
CALR-201ENST00000316448 SPRR2DP22532 72 aa5.07□□□□□ -1.6
CALR-201ENST00000316448 NEBP20929 6669 aa5.02□□□□□ -1.61
CALR-201ENST00000316448 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
CALR-201ENST00000316448 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
CALR-201ENST00000316448 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
CALR-201ENST00000316448 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
CALR-201ENST00000316448 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
CALR-201ENST00000316448 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
CALR-201ENST00000316448 INE1O15225 51 aa4.74□□□□□ -1.65
CALR-201ENST00000316448 MT1AP04731 61 aa4.73□□□□□ -1.65
CALR-201ENST00000316448 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CALR-201ENST00000316448 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
CALR-201ENST00000316448 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
CALR-201ENST00000316448 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
CALR-201ENST00000316448 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
CALR-201ENST00000316448 LCE4AQ5TA78 99 aa4.46□□□□□ -1.69
CALR-201ENST00000316448 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
CALR-201ENST00000316448 MT4P47944 62 aa4.44□□□□□ -1.7
CALR-201ENST00000316448 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
CALR-201ENST00000316448 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
CALR-201ENST00000316448 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
CALR-201ENST00000316448 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CALR-201ENST00000316448 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
CALR-201ENST00000316448 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
CALR-201ENST00000316448 MT3P25713 68 aa4.25□□□□□ -1.73
CALR-201ENST00000316448 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
CALR-201ENST00000316448 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
CALR-201ENST00000316448 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
CALR-201ENST00000316448 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CALR-201ENST00000316448 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
CALR-201ENST00000316448 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
CALR-201ENST00000316448 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
CALR-201ENST00000316448 PRM1P04553 51 aa3.71□□□□□ -1.82
CALR-201ENST00000316448 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CALR-201ENST00000316448 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
CALR-201ENST00000316448 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
CALR-201ENST00000316448 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
CALR-201ENST00000316448 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
CALR-201ENST00000316448 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
CALR-201ENST00000316448 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
CALR-201ENST00000316448 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
CALR-201ENST00000316448 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.85
CALR-201ENST00000316448 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
CALR-201ENST00000316448 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
CALR-201ENST00000316448 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
CALR-201ENST00000316448 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
CALR-201ENST00000316448 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
CALR-201ENST00000316448 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
CALR-201ENST00000316448 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
CALR-201ENST00000316448 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
CALR-201ENST00000316448 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CALR-201ENST00000316448 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
CALR-201ENST00000316448 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CALR-201ENST00000316448 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CALR-201ENST00000316448 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CALR-201ENST00000316448 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms