RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 M0QZ58 72 aa3.44□□□□□ -1.86
CDC42-201ENST00000315554 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
CDC42-201ENST00000315554 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
CDC42-201ENST00000315554 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
CDC42-201ENST00000315554 PLAC4Q8WY50 150 aa3.35□□□□□ -1.87
CDC42-201ENST00000315554 MT1XP80297 61 aa3.29□□□□□ -1.88
CDC42-201ENST00000315554 A0A1B0GU69 56 aa3.28□□□□□ -1.88
CDC42-201ENST00000315554 A0A0D9SG42 100 aa3.28□□□□□ -1.88
CDC42-201ENST00000315554 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
CDC42-201ENST00000315554 INE1O15225 51 aa3.25□□□□□ -1.89
CDC42-201ENST00000315554 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
CDC42-201ENST00000315554 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.89
CDC42-201ENST00000315554 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
CDC42-201ENST00000315554 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
CDC42-201ENST00000315554 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
CDC42-201ENST00000315554 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
CDC42-201ENST00000315554 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
CDC42-201ENST00000315554 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
CDC42-201ENST00000315554 MT3P25713 68 aa3.14□□□□□ -1.91
CDC42-201ENST00000315554 KMT2DO14686 5537 aa3.11□□□□□ -1.91
CDC42-201ENST00000315554 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
CDC42-201ENST00000315554 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
CDC42-201ENST00000315554 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.92
CDC42-201ENST00000315554 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
CDC42-201ENST00000315554 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
CDC42-201ENST00000315554 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
CDC42-201ENST00000315554 SPRR2EP22531 72 aa3□□□□□ -1.93
CDC42-201ENST00000315554 SPRR2BP35325 72 aa3□□□□□ -1.93
CDC42-201ENST00000315554 SPRR2AP35326 72 aa3□□□□□ -1.93
CDC42-201ENST00000315554 NEBP20929 6669 aa3□□□□□ -1.93
CDC42-201ENST00000315554 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
CDC42-201ENST00000315554 TNP1P09430 55 aa2.96□□□□□ -1.93
CDC42-201ENST00000315554 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
CDC42-201ENST00000315554 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
CDC42-201ENST00000315554 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
CDC42-201ENST00000315554 MT1EP04732 61 aa2.91□□□□□ -1.94
CDC42-201ENST00000315554 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.94
CDC42-201ENST00000315554 SPRR2DP22532 72 aa2.9□□□□□ -1.95
CDC42-201ENST00000315554 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
CDC42-201ENST00000315554 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
CDC42-201ENST00000315554 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
CDC42-201ENST00000315554 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
CDC42-201ENST00000315554 MT1LQ93083 61 aa2.81□□□□□ -1.96
CDC42-201ENST00000315554 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
CDC42-201ENST00000315554 MT1GP13640 62 aa2.77□□□□□ -1.97
CDC42-201ENST00000315554 MT1MQ8N339 61 aa2.77□□□□□ -1.97
CDC42-201ENST00000315554 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
CDC42-201ENST00000315554 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
CDC42-201ENST00000315554 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
CDC42-201ENST00000315554 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
CDC42-201ENST00000315554 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
CDC42-201ENST00000315554 MT4P47944 62 aa2.54□□□□□ -2
CDC42-201ENST00000315554 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
CDC42-201ENST00000315554 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
CDC42-201ENST00000315554 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CDC42-201ENST00000315554 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CDC42-201ENST00000315554 MT1AP04731 61 aa2.39□□□□□ -2.03
CDC42-201ENST00000315554 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
CDC42-201ENST00000315554 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CDC42-201ENST00000315554 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
CDC42-201ENST00000315554 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
CDC42-201ENST00000315554 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
CDC42-201ENST00000315554 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
CDC42-201ENST00000315554 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
CDC42-201ENST00000315554 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
CDC42-201ENST00000315554 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
CDC42-201ENST00000315554 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
CDC42-201ENST00000315554 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
CDC42-201ENST00000315554 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CDC42-201ENST00000315554 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CDC42-201ENST00000315554 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
CDC42-201ENST00000315554 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
CDC42-201ENST00000315554 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CDC42-201ENST00000315554 PRM1P04553 51 aa1.64□□□□□ -2.15
CDC42-201ENST00000315554 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CDC42-201ENST00000315554 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
CDC42-201ENST00000315554 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms