RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
SEC16A-204ENST00000313084 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
SEC16A-204ENST00000313084 INE1O15225 51 aa3.45□□□□□ -1.86
SEC16A-204ENST00000313084 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
SEC16A-204ENST00000313084 MT1EP04732 61 aa3.45□□□□□ -1.86
SEC16A-204ENST00000313084 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
SEC16A-204ENST00000313084 MT1LQ93083 61 aa3.44□□□□□ -1.86
SEC16A-204ENST00000313084 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SEC16A-204ENST00000313084 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
SEC16A-204ENST00000313084 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
SEC16A-204ENST00000313084 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
SEC16A-204ENST00000313084 MT1GP13640 62 aa3.37□□□□□ -1.87
SEC16A-204ENST00000313084 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
SEC16A-204ENST00000313084 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
SEC16A-204ENST00000313084 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
SEC16A-204ENST00000313084 MT1MQ8N339 61 aa3.25□□□□□ -1.89
SEC16A-204ENST00000313084 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
SEC16A-204ENST00000313084 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
SEC16A-204ENST00000313084 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
SEC16A-204ENST00000313084 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
SEC16A-204ENST00000313084 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
SEC16A-204ENST00000313084 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
SEC16A-204ENST00000313084 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
SEC16A-204ENST00000313084 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
SEC16A-204ENST00000313084 NEBP20929 6669 aa3.09□□□□□ -1.91
SEC16A-204ENST00000313084 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
SEC16A-204ENST00000313084 SPRR2EP22531 72 aa3.04□□□□□ -1.92
SEC16A-204ENST00000313084 SPRR2BP35325 72 aa3.04□□□□□ -1.92
SEC16A-204ENST00000313084 SPRR2AP35326 72 aa3.04□□□□□ -1.92
SEC16A-204ENST00000313084 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
SEC16A-204ENST00000313084 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
SEC16A-204ENST00000313084 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
SEC16A-204ENST00000313084 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
SEC16A-204ENST00000313084 SPRR2DP22532 72 aa2.88□□□□□ -1.95
SEC16A-204ENST00000313084 MT1AP04731 61 aa2.84□□□□□ -1.96
SEC16A-204ENST00000313084 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
SEC16A-204ENST00000313084 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
SEC16A-204ENST00000313084 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
SEC16A-204ENST00000313084 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
SEC16A-204ENST00000313084 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
SEC16A-204ENST00000313084 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SEC16A-204ENST00000313084 MT4P47944 62 aa2.68□□□□□ -1.98
SEC16A-204ENST00000313084 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
SEC16A-204ENST00000313084 PRM1P04553 51 aa2.66□□□□□ -1.98
SEC16A-204ENST00000313084 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
SEC16A-204ENST00000313084 MT3P25713 68 aa2.59□□□□□ -2
SEC16A-204ENST00000313084 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
SEC16A-204ENST00000313084 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
SEC16A-204ENST00000313084 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
SEC16A-204ENST00000313084 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
SEC16A-204ENST00000313084 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
SEC16A-204ENST00000313084 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
SEC16A-204ENST00000313084 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.02
SEC16A-204ENST00000313084 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
SEC16A-204ENST00000313084 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
SEC16A-204ENST00000313084 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
SEC16A-204ENST00000313084 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
SEC16A-204ENST00000313084 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
SEC16A-204ENST00000313084 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
SEC16A-204ENST00000313084 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
SEC16A-204ENST00000313084 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SEC16A-204ENST00000313084 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
SEC16A-204ENST00000313084 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
SEC16A-204ENST00000313084 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
SEC16A-204ENST00000313084 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
SEC16A-204ENST00000313084 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
SEC16A-204ENST00000313084 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
SEC16A-204ENST00000313084 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SEC16A-204ENST00000313084 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
SEC16A-204ENST00000313084 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
SEC16A-204ENST00000313084 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
SEC16A-204ENST00000313084 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
SEC16A-204ENST00000313084 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
SEC16A-204ENST00000313084 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
SEC16A-204ENST00000313084 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SEC16A-204ENST00000313084 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
SEC16A-204ENST00000313084 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 1011.9 ms