RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
SLC39A1-201ENST00000310483 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
SLC39A1-201ENST00000310483 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.58
SLC39A1-201ENST00000310483 MT1GP13640 62 aa5.11□□□□□ -1.59
SLC39A1-201ENST00000310483 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
SLC39A1-201ENST00000310483 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
SLC39A1-201ENST00000310483 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
SLC39A1-201ENST00000310483 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
SLC39A1-201ENST00000310483 MT1MQ8N339 61 aa4.97□□□□□ -1.61
SLC39A1-201ENST00000310483 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
SLC39A1-201ENST00000310483 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
SLC39A1-201ENST00000310483 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
SLC39A1-201ENST00000310483 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
SLC39A1-201ENST00000310483 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
SLC39A1-201ENST00000310483 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
SLC39A1-201ENST00000310483 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
SLC39A1-201ENST00000310483 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
SLC39A1-201ENST00000310483 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
SLC39A1-201ENST00000310483 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
SLC39A1-201ENST00000310483 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
SLC39A1-201ENST00000310483 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SLC39A1-201ENST00000310483 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
SLC39A1-201ENST00000310483 MT1AP04731 61 aa4.53□□□□□ -1.68
SLC39A1-201ENST00000310483 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
SLC39A1-201ENST00000310483 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
SLC39A1-201ENST00000310483 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
SLC39A1-201ENST00000310483 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
SLC39A1-201ENST00000310483 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
SLC39A1-201ENST00000310483 PRM1P04553 51 aa4.42□□□□□ -1.7
SLC39A1-201ENST00000310483 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
SLC39A1-201ENST00000310483 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SLC39A1-201ENST00000310483 SPRR2EP22531 72 aa4.32□□□□□ -1.72
SLC39A1-201ENST00000310483 SPRR2BP35325 72 aa4.32□□□□□ -1.72
SLC39A1-201ENST00000310483 SPRR2AP35326 72 aa4.32□□□□□ -1.72
SLC39A1-201ENST00000310483 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
SLC39A1-201ENST00000310483 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
SLC39A1-201ENST00000310483 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
SLC39A1-201ENST00000310483 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
SLC39A1-201ENST00000310483 SPRR2DP22532 72 aa4.13□□□□□ -1.75
SLC39A1-201ENST00000310483 NEBP20929 6669 aa4.1□□□□□ -1.75
SLC39A1-201ENST00000310483 MT3P25713 68 aa3.97□□□□□ -1.77
SLC39A1-201ENST00000310483 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SLC39A1-201ENST00000310483 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
SLC39A1-201ENST00000310483 MT4P47944 62 aa3.7□□□□□ -1.82
SLC39A1-201ENST00000310483 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
SLC39A1-201ENST00000310483 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
SLC39A1-201ENST00000310483 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SLC39A1-201ENST00000310483 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
SLC39A1-201ENST00000310483 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
SLC39A1-201ENST00000310483 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
SLC39A1-201ENST00000310483 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
SLC39A1-201ENST00000310483 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
SLC39A1-201ENST00000310483 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
SLC39A1-201ENST00000310483 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
SLC39A1-201ENST00000310483 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
SLC39A1-201ENST00000310483 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
SLC39A1-201ENST00000310483 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
SLC39A1-201ENST00000310483 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SLC39A1-201ENST00000310483 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
SLC39A1-201ENST00000310483 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
SLC39A1-201ENST00000310483 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
SLC39A1-201ENST00000310483 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SLC39A1-201ENST00000310483 LCE1CQ5T751 118 aa3□□□□□ -1.93
SLC39A1-201ENST00000310483 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
SLC39A1-201ENST00000310483 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
SLC39A1-201ENST00000310483 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
SLC39A1-201ENST00000310483 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
SLC39A1-201ENST00000310483 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SLC39A1-201ENST00000310483 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SLC39A1-201ENST00000310483 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SLC39A1-201ENST00000310483 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
SLC39A1-201ENST00000310483 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
SLC39A1-201ENST00000310483 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
SLC39A1-201ENST00000310483 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
SLC39A1-201ENST00000310483 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
SLC39A1-201ENST00000310483 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SLC39A1-201ENST00000310483 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms