RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
VCPIP1-201ENST00000310421 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
VCPIP1-201ENST00000310421 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
VCPIP1-201ENST00000310421 HERC2O95714 4834 aa3.22□□□□□ -1.89
VCPIP1-201ENST00000310421 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
VCPIP1-201ENST00000310421 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
VCPIP1-201ENST00000310421 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
VCPIP1-201ENST00000310421 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
VCPIP1-201ENST00000310421 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
VCPIP1-201ENST00000310421 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
VCPIP1-201ENST00000310421 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
VCPIP1-201ENST00000310421 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.91
VCPIP1-201ENST00000310421 LPAP08519 4548 aa3.14□□□□□ -1.91
VCPIP1-201ENST00000310421 KIAA1109Q2LD37 5005 aa3.13□□□□□ -1.91
VCPIP1-201ENST00000310421 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
VCPIP1-201ENST00000310421 HERC1Q15751 4861 aa3.07□□□□□ -1.92
VCPIP1-201ENST00000310421 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
VCPIP1-201ENST00000310421 HYDINQ4G0P3 5121 aa3.03□□□□□ -1.92
VCPIP1-201ENST00000310421 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
VCPIP1-201ENST00000310421 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
VCPIP1-201ENST00000310421 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
VCPIP1-201ENST00000310421 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
VCPIP1-201ENST00000310421 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
VCPIP1-201ENST00000310421 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
VCPIP1-201ENST00000310421 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.93
VCPIP1-201ENST00000310421 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
VCPIP1-201ENST00000310421 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
VCPIP1-201ENST00000310421 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
VCPIP1-201ENST00000310421 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
VCPIP1-201ENST00000310421 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
VCPIP1-201ENST00000310421 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
VCPIP1-201ENST00000310421 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
VCPIP1-201ENST00000310421 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
VCPIP1-201ENST00000310421 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
VCPIP1-201ENST00000310421 MUC2Q02817 5179 aa2.67□□□□□ -1.98
VCPIP1-201ENST00000310421 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.99
VCPIP1-201ENST00000310421 FAT4Q6V0I7 4981 aa2.64□□□□□ -1.99
VCPIP1-201ENST00000310421 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
VCPIP1-201ENST00000310421 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
VCPIP1-201ENST00000310421 FSIP2Q5CZC0 6907 aa2.55□□□□□ -2
VCPIP1-201ENST00000310421 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
VCPIP1-201ENST00000310421 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
VCPIP1-201ENST00000310421 NEBP20929 6669 aa2.43□□□□□ -2.02
VCPIP1-201ENST00000310421 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
VCPIP1-201ENST00000310421 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
VCPIP1-201ENST00000310421 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
VCPIP1-201ENST00000310421 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
VCPIP1-201ENST00000310421 USH2AO75445 5202 aa2.21□□□□□ -2.06
VCPIP1-201ENST00000310421 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
VCPIP1-201ENST00000310421 KMT2DO14686 5537 aa2.17□□□□□ -2.06
VCPIP1-201ENST00000310421 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
VCPIP1-201ENST00000310421 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
VCPIP1-201ENST00000310421 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.07
VCPIP1-201ENST00000310421 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
VCPIP1-201ENST00000310421 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
VCPIP1-201ENST00000310421 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
VCPIP1-201ENST00000310421 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
VCPIP1-201ENST00000310421 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
VCPIP1-201ENST00000310421 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
VCPIP1-201ENST00000310421 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
VCPIP1-201ENST00000310421 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
VCPIP1-201ENST00000310421 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
VCPIP1-201ENST00000310421 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
VCPIP1-201ENST00000310421 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
VCPIP1-201ENST00000310421 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
VCPIP1-201ENST00000310421 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
VCPIP1-201ENST00000310421 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
VCPIP1-201ENST00000310421 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
VCPIP1-201ENST00000310421 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
VCPIP1-201ENST00000310421 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
VCPIP1-201ENST00000310421 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
VCPIP1-201ENST00000310421 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
VCPIP1-201ENST00000310421 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
VCPIP1-201ENST00000310421 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
VCPIP1-201ENST00000310421 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
VCPIP1-201ENST00000310421 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
VCPIP1-201ENST00000310421 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 69.6 ms