RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
TRIM59-201ENST00000309784 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
TRIM59-201ENST00000309784 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
TRIM59-201ENST00000309784 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
TRIM59-201ENST00000309784 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
TRIM59-201ENST00000309784 SPRR2EP22531 72 aa3.83□□□□□ -1.8
TRIM59-201ENST00000309784 SPRR2BP35325 72 aa3.83□□□□□ -1.8
TRIM59-201ENST00000309784 SPRR2AP35326 72 aa3.83□□□□□ -1.8
TRIM59-201ENST00000309784 MT1GP13640 62 aa3.83□□□□□ -1.8
TRIM59-201ENST00000309784 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
TRIM59-201ENST00000309784 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
TRIM59-201ENST00000309784 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
TRIM59-201ENST00000309784 MT1MQ8N339 61 aa3.78□□□□□ -1.8
TRIM59-201ENST00000309784 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
TRIM59-201ENST00000309784 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
TRIM59-201ENST00000309784 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
TRIM59-201ENST00000309784 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
TRIM59-201ENST00000309784 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
TRIM59-201ENST00000309784 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
TRIM59-201ENST00000309784 SPRR2DP22532 72 aa3.69□□□□□ -1.82
TRIM59-201ENST00000309784 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
TRIM59-201ENST00000309784 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
TRIM59-201ENST00000309784 NEBP20929 6669 aa3.54□□□□□ -1.84
TRIM59-201ENST00000309784 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
TRIM59-201ENST00000309784 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
TRIM59-201ENST00000309784 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
TRIM59-201ENST00000309784 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
TRIM59-201ENST00000309784 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
TRIM59-201ENST00000309784 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
TRIM59-201ENST00000309784 MT1AP04731 61 aa3.32□□□□□ -1.88
TRIM59-201ENST00000309784 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
TRIM59-201ENST00000309784 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
TRIM59-201ENST00000309784 MT4P47944 62 aa3.27□□□□□ -1.89
TRIM59-201ENST00000309784 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
TRIM59-201ENST00000309784 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
TRIM59-201ENST00000309784 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
TRIM59-201ENST00000309784 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
TRIM59-201ENST00000309784 INE1O15225 51 aa3.17□□□□□ -1.9
TRIM59-201ENST00000309784 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
TRIM59-201ENST00000309784 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
TRIM59-201ENST00000309784 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
TRIM59-201ENST00000309784 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
TRIM59-201ENST00000309784 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
TRIM59-201ENST00000309784 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
TRIM59-201ENST00000309784 MT3P25713 68 aa3.07□□□□□ -1.92
TRIM59-201ENST00000309784 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
TRIM59-201ENST00000309784 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
TRIM59-201ENST00000309784 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
TRIM59-201ENST00000309784 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
TRIM59-201ENST00000309784 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
TRIM59-201ENST00000309784 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
TRIM59-201ENST00000309784 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
TRIM59-201ENST00000309784 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
TRIM59-201ENST00000309784 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
TRIM59-201ENST00000309784 PRM1P04553 51 aa2.6□□□□□ -1.99
TRIM59-201ENST00000309784 MUC5ACP98088 5654 aa2.54□□□□□ -2
TRIM59-201ENST00000309784 LCE1EQ5T753 118 aa2.53□□□□□ -2
TRIM59-201ENST00000309784 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
TRIM59-201ENST00000309784 KRTAP5-8O75690 187 aa2.46□□□□□ -2.01
TRIM59-201ENST00000309784 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
TRIM59-201ENST00000309784 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
TRIM59-201ENST00000309784 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
TRIM59-201ENST00000309784 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
TRIM59-201ENST00000309784 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
TRIM59-201ENST00000309784 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
TRIM59-201ENST00000309784 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
TRIM59-201ENST00000309784 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
TRIM59-201ENST00000309784 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
TRIM59-201ENST00000309784 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
TRIM59-201ENST00000309784 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
TRIM59-201ENST00000309784 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
TRIM59-201ENST00000309784 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
TRIM59-201ENST00000309784 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
TRIM59-201ENST00000309784 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
TRIM59-201ENST00000309784 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
TRIM59-201ENST00000309784 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TRIM59-201ENST00000309784 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 83.2 ms