RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
AFF1-201ENST00000307808 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
AFF1-201ENST00000307808 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
AFF1-201ENST00000307808 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
AFF1-201ENST00000307808 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
AFF1-201ENST00000307808 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
AFF1-201ENST00000307808 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
AFF1-201ENST00000307808 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.85
AFF1-201ENST00000307808 HYDINQ4G0P3 5121 aa3.46□□□□□ -1.86
AFF1-201ENST00000307808 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
AFF1-201ENST00000307808 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
AFF1-201ENST00000307808 KIAA1109Q2LD37 5005 aa3.45□□□□□ -1.86
AFF1-201ENST00000307808 RYR3Q15413 4870 aa3.43□□□□□ -1.86
AFF1-201ENST00000307808 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
AFF1-201ENST00000307808 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
AFF1-201ENST00000307808 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
AFF1-201ENST00000307808 HERC1Q15751 4861 aa3.33□□□□□ -1.88
AFF1-201ENST00000307808 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
AFF1-201ENST00000307808 RYR2Q92736 4967 aa3.32□□□□□ -1.88
AFF1-201ENST00000307808 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
AFF1-201ENST00000307808 KRTAP9-6A0A140TA67 174 aa3.27□□□□□ -1.89
AFF1-201ENST00000307808 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
AFF1-201ENST00000307808 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
AFF1-201ENST00000307808 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
AFF1-201ENST00000307808 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
AFF1-201ENST00000307808 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
AFF1-201ENST00000307808 HERC2O95714 4834 aa3.19□□□□□ -1.9
AFF1-201ENST00000307808 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
AFF1-201ENST00000307808 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
AFF1-201ENST00000307808 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
AFF1-201ENST00000307808 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
AFF1-201ENST00000307808 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
AFF1-201ENST00000307808 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
AFF1-201ENST00000307808 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
AFF1-201ENST00000307808 MUC2Q02817 5179 aa2.93□□□□□ -1.94
AFF1-201ENST00000307808 FAT4Q6V0I7 4981 aa2.92□□□□□ -1.94
AFF1-201ENST00000307808 HMCN2Q8NDA2 5059 aa2.9□□□□□ -1.95
AFF1-201ENST00000307808 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.95
AFF1-201ENST00000307808 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
AFF1-201ENST00000307808 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
AFF1-201ENST00000307808 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
AFF1-201ENST00000307808 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
AFF1-201ENST00000307808 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
AFF1-201ENST00000307808 USH2AO75445 5202 aa2.63□□□□□ -1.99
AFF1-201ENST00000307808 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
AFF1-201ENST00000307808 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
AFF1-201ENST00000307808 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
AFF1-201ENST00000307808 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2.01
AFF1-201ENST00000307808 KMT2DO14686 5537 aa2.47□□□□□ -2.01
AFF1-201ENST00000307808 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
AFF1-201ENST00000307808 NEBP20929 6669 aa2.44□□□□□ -2.02
AFF1-201ENST00000307808 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
AFF1-201ENST00000307808 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
AFF1-201ENST00000307808 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
AFF1-201ENST00000307808 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
AFF1-201ENST00000307808 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
AFF1-201ENST00000307808 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
AFF1-201ENST00000307808 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
AFF1-201ENST00000307808 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
AFF1-201ENST00000307808 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
AFF1-201ENST00000307808 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
AFF1-201ENST00000307808 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
AFF1-201ENST00000307808 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
AFF1-201ENST00000307808 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
AFF1-201ENST00000307808 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
AFF1-201ENST00000307808 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
AFF1-201ENST00000307808 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
AFF1-201ENST00000307808 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
AFF1-201ENST00000307808 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
AFF1-201ENST00000307808 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
AFF1-201ENST00000307808 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
AFF1-201ENST00000307808 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
AFF1-201ENST00000307808 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
AFF1-201ENST00000307808 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
AFF1-201ENST00000307808 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
AFF1-201ENST00000307808 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
AFF1-201ENST00000307808 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 25.7 ms