RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
TRIM56-201ENST00000306085 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
TRIM56-201ENST00000306085 TNXBP22105 4242 aa3.67□□□□□ -1.82
TRIM56-201ENST00000306085 RYR3Q15413 4870 aa3.66□□□□□ -1.82
TRIM56-201ENST00000306085 HYDINQ4G0P3 5121 aa3.66□□□□□ -1.82
TRIM56-201ENST00000306085 MT1AP04731 61 aa3.65□□□□□ -1.82
TRIM56-201ENST00000306085 RYR1P21817 5038 aa3.65□□□□□ -1.82
TRIM56-201ENST00000306085 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
TRIM56-201ENST00000306085 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
TRIM56-201ENST00000306085 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
TRIM56-201ENST00000306085 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
TRIM56-201ENST00000306085 LPAP08519 4548 aa3.49□□□□□ -1.85
TRIM56-201ENST00000306085 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
TRIM56-201ENST00000306085 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
TRIM56-201ENST00000306085 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
TRIM56-201ENST00000306085 KMT2CQ8NEZ4 4911 aaKnown RBP3.44□□□□□ -1.86
TRIM56-201ENST00000306085 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
TRIM56-201ENST00000306085 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
TRIM56-201ENST00000306085 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
TRIM56-201ENST00000306085 HERC2O95714 4834 aa3.36□□□□□ -1.87
TRIM56-201ENST00000306085 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
TRIM56-201ENST00000306085 BIRC6Q9NR09 4857 aa3.35□□□□□ -1.87
TRIM56-201ENST00000306085 LRP2P98164 4655 aa3.32□□□□□ -1.88
TRIM56-201ENST00000306085 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
TRIM56-201ENST00000306085 LCE2AQ5TA79 106 aaPredicted RBP3.32□□□□□ -1.88
TRIM56-201ENST00000306085 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
TRIM56-201ENST00000306085 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
TRIM56-201ENST00000306085 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
TRIM56-201ENST00000306085 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
TRIM56-201ENST00000306085 HERC1Q15751 4861 aa3.23□□□□□ -1.89
TRIM56-201ENST00000306085 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
TRIM56-201ENST00000306085 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
TRIM56-201ENST00000306085 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
TRIM56-201ENST00000306085 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
TRIM56-201ENST00000306085 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
TRIM56-201ENST00000306085 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
TRIM56-201ENST00000306085 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
TRIM56-201ENST00000306085 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TRIM56-201ENST00000306085 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
TRIM56-201ENST00000306085 MUC2Q02817 5179 aa2.96□□□□□ -1.94
TRIM56-201ENST00000306085 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
TRIM56-201ENST00000306085 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
TRIM56-201ENST00000306085 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.96
TRIM56-201ENST00000306085 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
TRIM56-201ENST00000306085 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
TRIM56-201ENST00000306085 USH2AO75445 5202 aa2.68□□□□□ -1.98
TRIM56-201ENST00000306085 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
TRIM56-201ENST00000306085 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
TRIM56-201ENST00000306085 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
TRIM56-201ENST00000306085 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
TRIM56-201ENST00000306085 KMT2DO14686 5537 aa2.43□□□□□ -2.02
TRIM56-201ENST00000306085 NEBP20929 6669 aa2.39□□□□□ -2.03
TRIM56-201ENST00000306085 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
TRIM56-201ENST00000306085 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.04
TRIM56-201ENST00000306085 KRTAP5-9P26371 169 aa2.34□□□□□ -2.04
TRIM56-201ENST00000306085 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
TRIM56-201ENST00000306085 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
TRIM56-201ENST00000306085 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
TRIM56-201ENST00000306085 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
TRIM56-201ENST00000306085 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
TRIM56-201ENST00000306085 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
TRIM56-201ENST00000306085 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
TRIM56-201ENST00000306085 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
TRIM56-201ENST00000306085 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
TRIM56-201ENST00000306085 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
TRIM56-201ENST00000306085 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
TRIM56-201ENST00000306085 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
TRIM56-201ENST00000306085 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
TRIM56-201ENST00000306085 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
TRIM56-201ENST00000306085 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
TRIM56-201ENST00000306085 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
TRIM56-201ENST00000306085 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
TRIM56-201ENST00000306085 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
TRIM56-201ENST00000306085 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
TRIM56-201ENST00000306085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
TRIM56-201ENST00000306085 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
TRIM56-201ENST00000306085 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 99.6 ms