RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
DDX54-201ENST00000306014 MT1EP04732 61 aa4.39□□□□□ -1.71
DDX54-201ENST00000306014 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
DDX54-201ENST00000306014 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
DDX54-201ENST00000306014 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
DDX54-201ENST00000306014 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
DDX54-201ENST00000306014 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
DDX54-201ENST00000306014 USH2AO75445 5202 aa4.26□□□□□ -1.73
DDX54-201ENST00000306014 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
DDX54-201ENST00000306014 SPRR2DP22532 72 aa4.25□□□□□ -1.73
DDX54-201ENST00000306014 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
DDX54-201ENST00000306014 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
DDX54-201ENST00000306014 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
DDX54-201ENST00000306014 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
DDX54-201ENST00000306014 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
DDX54-201ENST00000306014 MT1MQ8N339 61 aa4.18□□□□□ -1.74
DDX54-201ENST00000306014 KMT2DO14686 5537 aa4.17□□□□□ -1.74
DDX54-201ENST00000306014 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.74
DDX54-201ENST00000306014 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
DDX54-201ENST00000306014 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
DDX54-201ENST00000306014 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
DDX54-201ENST00000306014 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
DDX54-201ENST00000306014 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
DDX54-201ENST00000306014 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
DDX54-201ENST00000306014 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
DDX54-201ENST00000306014 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
DDX54-201ENST00000306014 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
DDX54-201ENST00000306014 PRM1P04553 51 aa3.91□□□□□ -1.78
DDX54-201ENST00000306014 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
DDX54-201ENST00000306014 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
DDX54-201ENST00000306014 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
DDX54-201ENST00000306014 MT1AP04731 61 aa3.81□□□□□ -1.8
DDX54-201ENST00000306014 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
DDX54-201ENST00000306014 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
DDX54-201ENST00000306014 MT4P47944 62 aa3.76□□□□□ -1.81
DDX54-201ENST00000306014 MT3P25713 68 aa3.75□□□□□ -1.81
DDX54-201ENST00000306014 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
DDX54-201ENST00000306014 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
DDX54-201ENST00000306014 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.84
DDX54-201ENST00000306014 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
DDX54-201ENST00000306014 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
DDX54-201ENST00000306014 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
DDX54-201ENST00000306014 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
DDX54-201ENST00000306014 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
DDX54-201ENST00000306014 NEBP20929 6669 aa3.44□□□□□ -1.86
DDX54-201ENST00000306014 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
DDX54-201ENST00000306014 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
DDX54-201ENST00000306014 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
DDX54-201ENST00000306014 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
DDX54-201ENST00000306014 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
DDX54-201ENST00000306014 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
DDX54-201ENST00000306014 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
DDX54-201ENST00000306014 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
DDX54-201ENST00000306014 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
DDX54-201ENST00000306014 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
DDX54-201ENST00000306014 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
DDX54-201ENST00000306014 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
DDX54-201ENST00000306014 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
DDX54-201ENST00000306014 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
DDX54-201ENST00000306014 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
DDX54-201ENST00000306014 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
DDX54-201ENST00000306014 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
DDX54-201ENST00000306014 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2.01
DDX54-201ENST00000306014 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
DDX54-201ENST00000306014 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
DDX54-201ENST00000306014 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
DDX54-201ENST00000306014 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
DDX54-201ENST00000306014 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
DDX54-201ENST00000306014 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
DDX54-201ENST00000306014 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
DDX54-201ENST00000306014 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
DDX54-201ENST00000306014 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
DDX54-201ENST00000306014 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
DDX54-201ENST00000306014 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
DDX54-201ENST00000306014 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
DDX54-201ENST00000306014 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
DDX54-201ENST00000306014 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 79.1 ms