RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-201ENST00000302763 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
CTNNA1-201ENST00000302763 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
CTNNA1-201ENST00000302763 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
CTNNA1-201ENST00000302763 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
CTNNA1-201ENST00000302763 MT1EP04732 61 aa2.69□□□□□ -1.98
CTNNA1-201ENST00000302763 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
CTNNA1-201ENST00000302763 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
CTNNA1-201ENST00000302763 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
CTNNA1-201ENST00000302763 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
CTNNA1-201ENST00000302763 MT1LQ93083 61 aa2.64□□□□□ -1.99
CTNNA1-201ENST00000302763 SPRR2FQ96RM1 72 aa2.64□□□□□ -1.99
CTNNA1-201ENST00000302763 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CTNNA1-201ENST00000302763 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
CTNNA1-201ENST00000302763 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
CTNNA1-201ENST00000302763 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
CTNNA1-201ENST00000302763 MT1GP13640 62 aa2.57□□□□□ -2
CTNNA1-201ENST00000302763 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
CTNNA1-201ENST00000302763 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
CTNNA1-201ENST00000302763 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
CTNNA1-201ENST00000302763 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
CTNNA1-201ENST00000302763 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
CTNNA1-201ENST00000302763 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
CTNNA1-201ENST00000302763 MT1MQ8N339 61 aa2.5□□□□□ -2.01
CTNNA1-201ENST00000302763 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
CTNNA1-201ENST00000302763 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
CTNNA1-201ENST00000302763 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
CTNNA1-201ENST00000302763 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CTNNA1-201ENST00000302763 LCE1DQ5T752 114 aa2.41□□□□□ -2.02
CTNNA1-201ENST00000302763 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.02
CTNNA1-201ENST00000302763 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.02
CTNNA1-201ENST00000302763 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.02
CTNNA1-201ENST00000302763 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
CTNNA1-201ENST00000302763 SPRR2EP22531 72 aa2.37□□□□□ -2.03
CTNNA1-201ENST00000302763 SPRR2BP35325 72 aa2.37□□□□□ -2.03
CTNNA1-201ENST00000302763 SPRR2AP35326 72 aa2.37□□□□□ -2.03
CTNNA1-201ENST00000302763 NEBP20929 6669 aa2.36□□□□□ -2.03
CTNNA1-201ENST00000302763 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CTNNA1-201ENST00000302763 KRTAP4-9Q9BYQ8 210 aa2.36□□□□□ -2.03
CTNNA1-201ENST00000302763 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CTNNA1-201ENST00000302763 SPRR2DP22532 72 aa2.26□□□□□ -2.05
CTNNA1-201ENST00000302763 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
CTNNA1-201ENST00000302763 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
CTNNA1-201ENST00000302763 KRTAP9-7A8MTY7 169 aa2.22□□□□□ -2.05
CTNNA1-201ENST00000302763 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
CTNNA1-201ENST00000302763 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
CTNNA1-201ENST00000302763 MT1AP04731 61 aa2.19□□□□□ -2.06
CTNNA1-201ENST00000302763 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
CTNNA1-201ENST00000302763 PRM1P04553 51 aa2.15□□□□□ -2.06
CTNNA1-201ENST00000302763 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
CTNNA1-201ENST00000302763 MT4P47944 62 aa2.14□□□□□ -2.07
CTNNA1-201ENST00000302763 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
CTNNA1-201ENST00000302763 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
CTNNA1-201ENST00000302763 MT3P25713 68 aa2.04□□□□□ -2.08
CTNNA1-201ENST00000302763 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CTNNA1-201ENST00000302763 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
CTNNA1-201ENST00000302763 LCE4AQ5TA78 99 aa2□□□□□ -2.09
CTNNA1-201ENST00000302763 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
CTNNA1-201ENST00000302763 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
CTNNA1-201ENST00000302763 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
CTNNA1-201ENST00000302763 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
CTNNA1-201ENST00000302763 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CTNNA1-201ENST00000302763 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
CTNNA1-201ENST00000302763 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.13
CTNNA1-201ENST00000302763 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
CTNNA1-201ENST00000302763 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
CTNNA1-201ENST00000302763 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
CTNNA1-201ENST00000302763 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
CTNNA1-201ENST00000302763 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
CTNNA1-201ENST00000302763 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
CTNNA1-201ENST00000302763 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CTNNA1-201ENST00000302763 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CTNNA1-201ENST00000302763 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
CTNNA1-201ENST00000302763 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CTNNA1-201ENST00000302763 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
CTNNA1-201ENST00000302763 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CTNNA1-201ENST00000302763 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 76.2 ms