RNA–Protein interactions for RNA: ENST00000301021.7

TRAPPC2L-201, Transcript of trafficking protein particle complex 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2L, Length 2,215 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-201ENST00000301021 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
TRAPPC2L-201ENST00000301021 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC2L-201ENST00000301021 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
TRAPPC2L-201ENST00000301021 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
TRAPPC2L-201ENST00000301021 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
TRAPPC2L-201ENST00000301021 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
TRAPPC2L-201ENST00000301021 MT1LQ93083 61 aa5.9□□□□□ -1.47
TRAPPC2L-201ENST00000301021 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
TRAPPC2L-201ENST00000301021 MT1EP04732 61 aa5.83□□□□□ -1.48
TRAPPC2L-201ENST00000301021 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
TRAPPC2L-201ENST00000301021 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.49
TRAPPC2L-201ENST00000301021 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
TRAPPC2L-201ENST00000301021 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
TRAPPC2L-201ENST00000301021 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
TRAPPC2L-201ENST00000301021 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
TRAPPC2L-201ENST00000301021 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
TRAPPC2L-201ENST00000301021 MT1GP13640 62 aa5.51□□□□□ -1.53
TRAPPC2L-201ENST00000301021 MT1MQ8N339 61 aa5.48□□□□□ -1.53
TRAPPC2L-201ENST00000301021 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
TRAPPC2L-201ENST00000301021 NEBP20929 6669 aa5.47□□□□□ -1.53
TRAPPC2L-201ENST00000301021 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
TRAPPC2L-201ENST00000301021 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
TRAPPC2L-201ENST00000301021 SPRR2EP22531 72 aa5.38□□□□□ -1.55
TRAPPC2L-201ENST00000301021 SPRR2BP35325 72 aa5.38□□□□□ -1.55
TRAPPC2L-201ENST00000301021 SPRR2AP35326 72 aa5.38□□□□□ -1.55
TRAPPC2L-201ENST00000301021 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
TRAPPC2L-201ENST00000301021 MT1AP04731 61 aa5.32□□□□□ -1.56
TRAPPC2L-201ENST00000301021 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
TRAPPC2L-201ENST00000301021 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
TRAPPC2L-201ENST00000301021 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.57
TRAPPC2L-201ENST00000301021 PRM1P04553 51 aa5.19□□□□□ -1.58
TRAPPC2L-201ENST00000301021 SPRR2DP22532 72 aa5.19□□□□□ -1.58
TRAPPC2L-201ENST00000301021 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
TRAPPC2L-201ENST00000301021 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC2L-201ENST00000301021 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
TRAPPC2L-201ENST00000301021 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
TRAPPC2L-201ENST00000301021 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
TRAPPC2L-201ENST00000301021 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
TRAPPC2L-201ENST00000301021 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
TRAPPC2L-201ENST00000301021 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
TRAPPC2L-201ENST00000301021 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
TRAPPC2L-201ENST00000301021 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
TRAPPC2L-201ENST00000301021 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
TRAPPC2L-201ENST00000301021 MT4P47944 62 aa4.56□□□□□ -1.68
TRAPPC2L-201ENST00000301021 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
TRAPPC2L-201ENST00000301021 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
TRAPPC2L-201ENST00000301021 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
TRAPPC2L-201ENST00000301021 MT3P25713 68 aa4.4□□□□□ -1.7
TRAPPC2L-201ENST00000301021 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.72
TRAPPC2L-201ENST00000301021 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
TRAPPC2L-201ENST00000301021 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
TRAPPC2L-201ENST00000301021 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
TRAPPC2L-201ENST00000301021 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
TRAPPC2L-201ENST00000301021 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
TRAPPC2L-201ENST00000301021 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
TRAPPC2L-201ENST00000301021 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
TRAPPC2L-201ENST00000301021 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
TRAPPC2L-201ENST00000301021 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
TRAPPC2L-201ENST00000301021 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
TRAPPC2L-201ENST00000301021 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
TRAPPC2L-201ENST00000301021 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
TRAPPC2L-201ENST00000301021 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
TRAPPC2L-201ENST00000301021 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
TRAPPC2L-201ENST00000301021 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.84
TRAPPC2L-201ENST00000301021 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
TRAPPC2L-201ENST00000301021 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
TRAPPC2L-201ENST00000301021 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC2L-201ENST00000301021 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
TRAPPC2L-201ENST00000301021 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
TRAPPC2L-201ENST00000301021 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC2L-201ENST00000301021 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.89
TRAPPC2L-201ENST00000301021 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
TRAPPC2L-201ENST00000301021 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
TRAPPC2L-201ENST00000301021 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
TRAPPC2L-201ENST00000301021 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TRAPPC2L-201ENST00000301021 PHGR1C9JFL3 82 aa2.65□□□□□ -1.98
TRAPPC2L-201ENST00000301021 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 71.3 ms