RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 MT1EP04732 61 aa4.83□□□□□ -1.64
KDM1B-201ENST00000297792 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
KDM1B-201ENST00000297792 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
KDM1B-201ENST00000297792 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
KDM1B-201ENST00000297792 MT1GP13640 62 aa4.79□□□□□ -1.64
KDM1B-201ENST00000297792 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
KDM1B-201ENST00000297792 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
KDM1B-201ENST00000297792 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
KDM1B-201ENST00000297792 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
KDM1B-201ENST00000297792 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
KDM1B-201ENST00000297792 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
KDM1B-201ENST00000297792 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
KDM1B-201ENST00000297792 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
KDM1B-201ENST00000297792 MT1MQ8N339 61 aa4.53□□□□□ -1.68
KDM1B-201ENST00000297792 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
KDM1B-201ENST00000297792 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
KDM1B-201ENST00000297792 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
KDM1B-201ENST00000297792 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
KDM1B-201ENST00000297792 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
KDM1B-201ENST00000297792 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
KDM1B-201ENST00000297792 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
KDM1B-201ENST00000297792 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
KDM1B-201ENST00000297792 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
KDM1B-201ENST00000297792 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
KDM1B-201ENST00000297792 PRM1P04553 51 aa4.1□□□□□ -1.75
KDM1B-201ENST00000297792 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
KDM1B-201ENST00000297792 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
KDM1B-201ENST00000297792 SPRR2EP22531 72 aa4.05□□□□□ -1.76
KDM1B-201ENST00000297792 SPRR2BP35325 72 aa4.05□□□□□ -1.76
KDM1B-201ENST00000297792 SPRR2AP35326 72 aa4.05□□□□□ -1.76
KDM1B-201ENST00000297792 MT1AP04731 61 aa4.02□□□□□ -1.77
KDM1B-201ENST00000297792 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
KDM1B-201ENST00000297792 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
KDM1B-201ENST00000297792 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
KDM1B-201ENST00000297792 SPRR2DP22532 72 aa3.85□□□□□ -1.79
KDM1B-201ENST00000297792 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
KDM1B-201ENST00000297792 MT3P25713 68 aa3.68□□□□□ -1.82
KDM1B-201ENST00000297792 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.82
KDM1B-201ENST00000297792 MT4P47944 62 aa3.57□□□□□ -1.84
KDM1B-201ENST00000297792 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
KDM1B-201ENST00000297792 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
KDM1B-201ENST00000297792 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
KDM1B-201ENST00000297792 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
KDM1B-201ENST00000297792 NEBP20929 6669 aa3.44□□□□□ -1.86
KDM1B-201ENST00000297792 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
KDM1B-201ENST00000297792 LCE1DQ5T752 114 aa3.34□□□□□ -1.88
KDM1B-201ENST00000297792 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
KDM1B-201ENST00000297792 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
KDM1B-201ENST00000297792 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
KDM1B-201ENST00000297792 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
KDM1B-201ENST00000297792 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.9
KDM1B-201ENST00000297792 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
KDM1B-201ENST00000297792 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
KDM1B-201ENST00000297792 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
KDM1B-201ENST00000297792 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
KDM1B-201ENST00000297792 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
KDM1B-201ENST00000297792 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
KDM1B-201ENST00000297792 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
KDM1B-201ENST00000297792 KRTAP4-2Q9BYR5 136 aa2.79□□□□□ -1.96
KDM1B-201ENST00000297792 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
KDM1B-201ENST00000297792 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
KDM1B-201ENST00000297792 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
KDM1B-201ENST00000297792 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
KDM1B-201ENST00000297792 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
KDM1B-201ENST00000297792 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
KDM1B-201ENST00000297792 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.98
KDM1B-201ENST00000297792 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
KDM1B-201ENST00000297792 KRTAP5-8O75690 187 aa2.56□□□□□ -2
KDM1B-201ENST00000297792 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
KDM1B-201ENST00000297792 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
KDM1B-201ENST00000297792 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
KDM1B-201ENST00000297792 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
KDM1B-201ENST00000297792 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
KDM1B-201ENST00000297792 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
KDM1B-201ENST00000297792 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
KDM1B-201ENST00000297792 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
KDM1B-201ENST00000297792 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 75.1 ms