RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
TTC39B-201ENST00000297615 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
TTC39B-201ENST00000297615 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
TTC39B-201ENST00000297615 MT1EP04732 61 aa4.67□□□□□ -1.66
TTC39B-201ENST00000297615 MT1LQ93083 61 aa4.66□□□□□ -1.66
TTC39B-201ENST00000297615 MT1GP13640 62 aa4.63□□□□□ -1.67
TTC39B-201ENST00000297615 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
TTC39B-201ENST00000297615 INE1O15225 51 aa4.61□□□□□ -1.67
TTC39B-201ENST00000297615 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
TTC39B-201ENST00000297615 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.67
TTC39B-201ENST00000297615 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
TTC39B-201ENST00000297615 MT1MQ8N339 61 aa4.41□□□□□ -1.7
TTC39B-201ENST00000297615 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
TTC39B-201ENST00000297615 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
TTC39B-201ENST00000297615 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
TTC39B-201ENST00000297615 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
TTC39B-201ENST00000297615 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
TTC39B-201ENST00000297615 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
TTC39B-201ENST00000297615 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
TTC39B-201ENST00000297615 SPRR2EP22531 72 aa4.18□□□□□ -1.74
TTC39B-201ENST00000297615 SPRR2BP35325 72 aa4.18□□□□□ -1.74
TTC39B-201ENST00000297615 SPRR2AP35326 72 aa4.18□□□□□ -1.74
TTC39B-201ENST00000297615 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
TTC39B-201ENST00000297615 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
TTC39B-201ENST00000297615 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
TTC39B-201ENST00000297615 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
TTC39B-201ENST00000297615 SPRR2DP22532 72 aa3.96□□□□□ -1.77
TTC39B-201ENST00000297615 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
TTC39B-201ENST00000297615 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
TTC39B-201ENST00000297615 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
TTC39B-201ENST00000297615 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
TTC39B-201ENST00000297615 MT1AP04731 61 aa3.81□□□□□ -1.8
TTC39B-201ENST00000297615 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
TTC39B-201ENST00000297615 MT4P47944 62 aa3.75□□□□□ -1.81
TTC39B-201ENST00000297615 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
TTC39B-201ENST00000297615 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
TTC39B-201ENST00000297615 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
TTC39B-201ENST00000297615 PRM1P04553 51 aa3.67□□□□□ -1.82
TTC39B-201ENST00000297615 NEBP20929 6669 aa3.67□□□□□ -1.82
TTC39B-201ENST00000297615 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
TTC39B-201ENST00000297615 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
TTC39B-201ENST00000297615 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
TTC39B-201ENST00000297615 MT3P25713 68 aa3.49□□□□□ -1.85
TTC39B-201ENST00000297615 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
TTC39B-201ENST00000297615 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
TTC39B-201ENST00000297615 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
TTC39B-201ENST00000297615 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
TTC39B-201ENST00000297615 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
TTC39B-201ENST00000297615 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
TTC39B-201ENST00000297615 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
TTC39B-201ENST00000297615 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
TTC39B-201ENST00000297615 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
TTC39B-201ENST00000297615 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
TTC39B-201ENST00000297615 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
TTC39B-201ENST00000297615 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
TTC39B-201ENST00000297615 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
TTC39B-201ENST00000297615 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
TTC39B-201ENST00000297615 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
TTC39B-201ENST00000297615 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
TTC39B-201ENST00000297615 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
TTC39B-201ENST00000297615 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
TTC39B-201ENST00000297615 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
TTC39B-201ENST00000297615 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
TTC39B-201ENST00000297615 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
TTC39B-201ENST00000297615 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
TTC39B-201ENST00000297615 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
TTC39B-201ENST00000297615 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
TTC39B-201ENST00000297615 LCE1CQ5T751 118 aa2.56□□□□□ -2
TTC39B-201ENST00000297615 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
TTC39B-201ENST00000297615 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
TTC39B-201ENST00000297615 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
TTC39B-201ENST00000297615 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
TTC39B-201ENST00000297615 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
TTC39B-201ENST00000297615 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TTC39B-201ENST00000297615 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
TTC39B-201ENST00000297615 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
TTC39B-201ENST00000297615 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 117.8 ms