RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
PRKAA1-201ENST00000296800 R4GN34 69 aa3.48□□□□□ -1.85
PRKAA1-201ENST00000296800 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
PRKAA1-201ENST00000296800 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
PRKAA1-201ENST00000296800 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
PRKAA1-201ENST00000296800 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PRKAA1-201ENST00000296800 CRIPTQ9P021 101 aa3.43□□□□□ -1.86
PRKAA1-201ENST00000296800 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
PRKAA1-201ENST00000296800 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
PRKAA1-201ENST00000296800 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
PRKAA1-201ENST00000296800 NEBP20929 6669 aa3.35□□□□□ -1.87
PRKAA1-201ENST00000296800 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
PRKAA1-201ENST00000296800 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
PRKAA1-201ENST00000296800 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
PRKAA1-201ENST00000296800 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
PRKAA1-201ENST00000296800 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
PRKAA1-201ENST00000296800 USH2AO75445 5202 aa3.24□□□□□ -1.89
PRKAA1-201ENST00000296800 MT1HP80294 61 aa3.24□□□□□ -1.89
PRKAA1-201ENST00000296800 M0R2T5 61 aa3.23□□□□□ -1.89
PRKAA1-201ENST00000296800 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
PRKAA1-201ENST00000296800 TNP1P09430 55 aa3.19□□□□□ -1.9
PRKAA1-201ENST00000296800 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
PRKAA1-201ENST00000296800 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
PRKAA1-201ENST00000296800 MT2AP02795 61 aa3.17□□□□□ -1.9
PRKAA1-201ENST00000296800 MT1FP04733 61 aa3.15□□□□□ -1.91
PRKAA1-201ENST00000296800 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PRKAA1-201ENST00000296800 KRTAP10-10P60014 251 aa3.14□□□□□ -1.91
PRKAA1-201ENST00000296800 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
PRKAA1-201ENST00000296800 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
PRKAA1-201ENST00000296800 MT1BP07438 61 aa3.04□□□□□ -1.92
PRKAA1-201ENST00000296800 KMT2DO14686 5537 aa3.04□□□□□ -1.92
PRKAA1-201ENST00000296800 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
PRKAA1-201ENST00000296800 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
PRKAA1-201ENST00000296800 MT1XP80297 61 aa3□□□□□ -1.93
PRKAA1-201ENST00000296800 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
PRKAA1-201ENST00000296800 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
PRKAA1-201ENST00000296800 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
PRKAA1-201ENST00000296800 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
PRKAA1-201ENST00000296800 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
PRKAA1-201ENST00000296800 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
PRKAA1-201ENST00000296800 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PRKAA1-201ENST00000296800 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
PRKAA1-201ENST00000296800 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
PRKAA1-201ENST00000296800 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
PRKAA1-201ENST00000296800 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
PRKAA1-201ENST00000296800 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
PRKAA1-201ENST00000296800 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
PRKAA1-201ENST00000296800 SPRR2EP22531 72 aa2.69□□□□□ -1.98
PRKAA1-201ENST00000296800 SPRR2BP35325 72 aa2.69□□□□□ -1.98
PRKAA1-201ENST00000296800 SPRR2AP35326 72 aa2.69□□□□□ -1.98
PRKAA1-201ENST00000296800 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
PRKAA1-201ENST00000296800 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
PRKAA1-201ENST00000296800 MT1EP04732 61 aa2.62□□□□□ -1.99
PRKAA1-201ENST00000296800 SPRR2DP22532 72 aa2.6□□□□□ -1.99
PRKAA1-201ENST00000296800 MT1LQ93083 61 aa2.6□□□□□ -1.99
PRKAA1-201ENST00000296800 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
PRKAA1-201ENST00000296800 INE1O15225 51 aa2.56□□□□□ -2
PRKAA1-201ENST00000296800 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
PRKAA1-201ENST00000296800 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
PRKAA1-201ENST00000296800 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
PRKAA1-201ENST00000296800 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
PRKAA1-201ENST00000296800 MT1MQ8N339 61 aa2.46□□□□□ -2.02
PRKAA1-201ENST00000296800 MT1GP13640 62 aa2.45□□□□□ -2.02
PRKAA1-201ENST00000296800 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
PRKAA1-201ENST00000296800 MT4P47944 62 aa2.35□□□□□ -2.03
PRKAA1-201ENST00000296800 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
PRKAA1-201ENST00000296800 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
PRKAA1-201ENST00000296800 MT1AP04731 61 aa2.22□□□□□ -2.05
PRKAA1-201ENST00000296800 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
PRKAA1-201ENST00000296800 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
PRKAA1-201ENST00000296800 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
PRKAA1-201ENST00000296800 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
PRKAA1-201ENST00000296800 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
PRKAA1-201ENST00000296800 PRM1P04553 51 aa1.89□□□□□ -2.11
PRKAA1-201ENST00000296800 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
PRKAA1-201ENST00000296800 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
PRKAA1-201ENST00000296800 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 119.7 ms