RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
FUBP1-201ENST00000294623 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
FUBP1-201ENST00000294623 LCE2BO14633 110 aa4.63□□□□□ -1.67
FUBP1-201ENST00000294623 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
FUBP1-201ENST00000294623 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
FUBP1-201ENST00000294623 MT1AP04731 61 aa4.38□□□□□ -1.71
FUBP1-201ENST00000294623 MT1GP13640 62 aa4.33□□□□□ -1.72
FUBP1-201ENST00000294623 NEBP20929 6669 aa4.31□□□□□ -1.72
FUBP1-201ENST00000294623 USH2AO75445 5202 aa4.31□□□□□ -1.72
FUBP1-201ENST00000294623 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
FUBP1-201ENST00000294623 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
FUBP1-201ENST00000294623 MT1MQ8N339 61 aa4.3□□□□□ -1.72
FUBP1-201ENST00000294623 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
FUBP1-201ENST00000294623 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
FUBP1-201ENST00000294623 KMT2DO14686 5537 aa4.27□□□□□ -1.73
FUBP1-201ENST00000294623 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
FUBP1-201ENST00000294623 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
FUBP1-201ENST00000294623 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
FUBP1-201ENST00000294623 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
FUBP1-201ENST00000294623 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
FUBP1-201ENST00000294623 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
FUBP1-201ENST00000294623 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
FUBP1-201ENST00000294623 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
FUBP1-201ENST00000294623 PRM1P04553 51 aa4.13□□□□□ -1.75
FUBP1-201ENST00000294623 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
FUBP1-201ENST00000294623 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
FUBP1-201ENST00000294623 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
FUBP1-201ENST00000294623 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
FUBP1-201ENST00000294623 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
FUBP1-201ENST00000294623 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
FUBP1-201ENST00000294623 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
FUBP1-201ENST00000294623 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
FUBP1-201ENST00000294623 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
FUBP1-201ENST00000294623 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
FUBP1-201ENST00000294623 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
FUBP1-201ENST00000294623 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
FUBP1-201ENST00000294623 SPRR2AP35326 72 aa3.74□□□□□ -1.81
FUBP1-201ENST00000294623 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
FUBP1-201ENST00000294623 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
FUBP1-201ENST00000294623 SPRR2EP22531 72 aa3.6□□□□□ -1.83
FUBP1-201ENST00000294623 MT3P25713 68 aa3.6□□□□□ -1.83
FUBP1-201ENST00000294623 SPRR2BP35325 72 aa3.56□□□□□ -1.84
FUBP1-201ENST00000294623 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
FUBP1-201ENST00000294623 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
FUBP1-201ENST00000294623 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
FUBP1-201ENST00000294623 SPRR2DP22532 72 aa3.42□□□□□ -1.86
FUBP1-201ENST00000294623 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
FUBP1-201ENST00000294623 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
FUBP1-201ENST00000294623 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
FUBP1-201ENST00000294623 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
FUBP1-201ENST00000294623 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.89
FUBP1-201ENST00000294623 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
FUBP1-201ENST00000294623 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
FUBP1-201ENST00000294623 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
FUBP1-201ENST00000294623 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
FUBP1-201ENST00000294623 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
FUBP1-201ENST00000294623 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
FUBP1-201ENST00000294623 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
FUBP1-201ENST00000294623 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
FUBP1-201ENST00000294623 MUC5ACP98088 5654 aa3□□□□□ -1.93
FUBP1-201ENST00000294623 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
FUBP1-201ENST00000294623 MT4P47944 62 aa2.98□□□□□ -1.93
FUBP1-201ENST00000294623 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
FUBP1-201ENST00000294623 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
FUBP1-201ENST00000294623 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
FUBP1-201ENST00000294623 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
FUBP1-201ENST00000294623 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
FUBP1-201ENST00000294623 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
FUBP1-201ENST00000294623 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
FUBP1-201ENST00000294623 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
FUBP1-201ENST00000294623 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
FUBP1-201ENST00000294623 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
FUBP1-201ENST00000294623 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
FUBP1-201ENST00000294623 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
FUBP1-201ENST00000294623 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
FUBP1-201ENST00000294623 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
FUBP1-201ENST00000294623 PHGR1C9JFL3 82 aa2□□□□□ -2.09
FUBP1-201ENST00000294623 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 77.5 ms