RNA–Protein interactions for RNA: ENST00000293618.12

LARP4-201, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 6,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-201ENST00000293618 PRM1P04553 51 aa4.14□□□□□ -1.75
LARP4-201ENST00000293618 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
LARP4-201ENST00000293618 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.76
LARP4-201ENST00000293618 MT3P25713 68 aa4.04□□□□□ -1.76
LARP4-201ENST00000293618 SPRR2DP22532 72 aa4.02□□□□□ -1.77
LARP4-201ENST00000293618 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
LARP4-201ENST00000293618 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
LARP4-201ENST00000293618 RNF213Q63HN8 5207 aa4□□□□□ -1.77
LARP4-201ENST00000293618 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
LARP4-201ENST00000293618 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
LARP4-201ENST00000293618 MT1AP04731 61 aa3.95□□□□□ -1.78
LARP4-201ENST00000293618 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
LARP4-201ENST00000293618 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
LARP4-201ENST00000293618 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
LARP4-201ENST00000293618 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
LARP4-201ENST00000293618 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
LARP4-201ENST00000293618 MUC2Q02817 5179 aa3.69□□□□□ -1.82
LARP4-201ENST00000293618 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
LARP4-201ENST00000293618 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
LARP4-201ENST00000293618 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
LARP4-201ENST00000293618 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
LARP4-201ENST00000293618 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
LARP4-201ENST00000293618 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
LARP4-201ENST00000293618 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.83
LARP4-201ENST00000293618 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
LARP4-201ENST00000293618 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
LARP4-201ENST00000293618 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
LARP4-201ENST00000293618 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
LARP4-201ENST00000293618 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
LARP4-201ENST00000293618 USH2AO75445 5202 aa3.52□□□□□ -1.85
LARP4-201ENST00000293618 MT4P47944 62 aa3.49□□□□□ -1.85
LARP4-201ENST00000293618 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
LARP4-201ENST00000293618 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
LARP4-201ENST00000293618 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
LARP4-201ENST00000293618 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
LARP4-201ENST00000293618 KRTAP9-6A0A140TA67 174 aa3.25□□□□□ -1.89
LARP4-201ENST00000293618 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
LARP4-201ENST00000293618 KMT2DO14686 5537 aa3.22□□□□□ -1.89
LARP4-201ENST00000293618 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
LARP4-201ENST00000293618 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.92
LARP4-201ENST00000293618 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
LARP4-201ENST00000293618 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
LARP4-201ENST00000293618 KRTAP5-9P26371 169 aa3□□□□□ -1.93
LARP4-201ENST00000293618 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
LARP4-201ENST00000293618 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
LARP4-201ENST00000293618 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
LARP4-201ENST00000293618 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
LARP4-201ENST00000293618 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
LARP4-201ENST00000293618 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
LARP4-201ENST00000293618 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
LARP4-201ENST00000293618 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
LARP4-201ENST00000293618 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
LARP4-201ENST00000293618 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
LARP4-201ENST00000293618 NEBP20929 6669 aa2.7□□□□□ -1.98
LARP4-201ENST00000293618 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
LARP4-201ENST00000293618 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
LARP4-201ENST00000293618 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
LARP4-201ENST00000293618 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
LARP4-201ENST00000293618 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
LARP4-201ENST00000293618 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
LARP4-201ENST00000293618 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
LARP4-201ENST00000293618 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
LARP4-201ENST00000293618 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
LARP4-201ENST00000293618 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
LARP4-201ENST00000293618 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
LARP4-201ENST00000293618 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
LARP4-201ENST00000293618 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
LARP4-201ENST00000293618 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
LARP4-201ENST00000293618 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
LARP4-201ENST00000293618 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
LARP4-201ENST00000293618 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
LARP4-201ENST00000293618 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
LARP4-201ENST00000293618 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
LARP4-201ENST00000293618 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
LARP4-201ENST00000293618 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
LARP4-201ENST00000293618 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
LARP4-201ENST00000293618 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 178.3 ms