RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 KRTAP19-6Q3LI70 58 aa3.58□□□□□ -1.84
PKNOX1-201ENST00000291547 SPRR2DP22532 72 aa3.55□□□□□ -1.84
PKNOX1-201ENST00000291547 MT3P25713 68 aa3.51□□□□□ -1.85
PKNOX1-201ENST00000291547 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
PKNOX1-201ENST00000291547 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
PKNOX1-201ENST00000291547 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
PKNOX1-201ENST00000291547 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
PKNOX1-201ENST00000291547 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
PKNOX1-201ENST00000291547 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.86
PKNOX1-201ENST00000291547 MT1LQ93083 61 aa3.4□□□□□ -1.86
PKNOX1-201ENST00000291547 PRM1P04553 51 aa3.39□□□□□ -1.87
PKNOX1-201ENST00000291547 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
PKNOX1-201ENST00000291547 MT1EP04732 61 aa3.37□□□□□ -1.87
PKNOX1-201ENST00000291547 USH2AO75445 5202 aa3.36□□□□□ -1.87
PKNOX1-201ENST00000291547 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
PKNOX1-201ENST00000291547 MT1MQ8N339 61 aa3.24□□□□□ -1.89
PKNOX1-201ENST00000291547 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
PKNOX1-201ENST00000291547 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
PKNOX1-201ENST00000291547 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
PKNOX1-201ENST00000291547 MT4P47944 62 aa3.19□□□□□ -1.9
PKNOX1-201ENST00000291547 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
PKNOX1-201ENST00000291547 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
PKNOX1-201ENST00000291547 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
PKNOX1-201ENST00000291547 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
PKNOX1-201ENST00000291547 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.9
PKNOX1-201ENST00000291547 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
PKNOX1-201ENST00000291547 FCGBPQ9Y6R7 5405 aaPredicted RBP3.11□□□□□ -1.91
PKNOX1-201ENST00000291547 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
PKNOX1-201ENST00000291547 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
PKNOX1-201ENST00000291547 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
PKNOX1-201ENST00000291547 MT1AP04731 61 aa3.06□□□□□ -1.92
PKNOX1-201ENST00000291547 KMT2DO14686 5537 aa3.05□□□□□ -1.92
PKNOX1-201ENST00000291547 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
PKNOX1-201ENST00000291547 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.93
PKNOX1-201ENST00000291547 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
PKNOX1-201ENST00000291547 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
PKNOX1-201ENST00000291547 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
PKNOX1-201ENST00000291547 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
PKNOX1-201ENST00000291547 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
PKNOX1-201ENST00000291547 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
PKNOX1-201ENST00000291547 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
PKNOX1-201ENST00000291547 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
PKNOX1-201ENST00000291547 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
PKNOX1-201ENST00000291547 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
PKNOX1-201ENST00000291547 KRTAP9-4Q9BYQ2 154 aa2.77□□□□□ -1.97
PKNOX1-201ENST00000291547 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
PKNOX1-201ENST00000291547 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
PKNOX1-201ENST00000291547 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
PKNOX1-201ENST00000291547 NEBP20929 6669 aa2.74□□□□□ -1.97
PKNOX1-201ENST00000291547 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
PKNOX1-201ENST00000291547 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
PKNOX1-201ENST00000291547 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
PKNOX1-201ENST00000291547 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
PKNOX1-201ENST00000291547 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
PKNOX1-201ENST00000291547 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
PKNOX1-201ENST00000291547 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
PKNOX1-201ENST00000291547 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
PKNOX1-201ENST00000291547 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
PKNOX1-201ENST00000291547 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
PKNOX1-201ENST00000291547 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
PKNOX1-201ENST00000291547 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.07
PKNOX1-201ENST00000291547 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
PKNOX1-201ENST00000291547 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
PKNOX1-201ENST00000291547 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
PKNOX1-201ENST00000291547 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
PKNOX1-201ENST00000291547 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
PKNOX1-201ENST00000291547 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
PKNOX1-201ENST00000291547 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
PKNOX1-201ENST00000291547 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
PKNOX1-201ENST00000291547 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
PKNOX1-201ENST00000291547 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
PKNOX1-201ENST00000291547 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
PKNOX1-201ENST00000291547 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
PKNOX1-201ENST00000291547 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
PKNOX1-201ENST00000291547 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
PKNOX1-201ENST00000291547 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
PKNOX1-201ENST00000291547 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 62.4 ms