RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
ACTC1-201ENST00000290378 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
ACTC1-201ENST00000290378 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
ACTC1-201ENST00000290378 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
ACTC1-201ENST00000290378 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
ACTC1-201ENST00000290378 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
ACTC1-201ENST00000290378 MT1EP04732 61 aa3.64□□□□□ -1.83
ACTC1-201ENST00000290378 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
ACTC1-201ENST00000290378 LCE3BQ5TA77 95 aa3.64□□□□□ -1.83
ACTC1-201ENST00000290378 MT1LQ93083 61 aa3.63□□□□□ -1.83
ACTC1-201ENST00000290378 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.84
ACTC1-201ENST00000290378 SPRR2EP22531 72 aa3.59□□□□□ -1.84
ACTC1-201ENST00000290378 SPRR2BP35325 72 aa3.59□□□□□ -1.84
ACTC1-201ENST00000290378 SPRR2AP35326 72 aa3.59□□□□□ -1.84
ACTC1-201ENST00000290378 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
ACTC1-201ENST00000290378 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
ACTC1-201ENST00000290378 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
ACTC1-201ENST00000290378 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
ACTC1-201ENST00000290378 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
ACTC1-201ENST00000290378 LCE2DQ5TA82 110 aaPredicted RBP3.51□□□□□ -1.85
ACTC1-201ENST00000290378 MT1MQ8N339 61 aa3.47□□□□□ -1.85
ACTC1-201ENST00000290378 SPRR2DP22532 72 aa3.42□□□□□ -1.86
ACTC1-201ENST00000290378 PRM1P04553 51 aa3.39□□□□□ -1.87
ACTC1-201ENST00000290378 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
ACTC1-201ENST00000290378 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
ACTC1-201ENST00000290378 MDN1Q9NU22 5596 aa3.34□□□□□ -1.88
ACTC1-201ENST00000290378 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
ACTC1-201ENST00000290378 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
ACTC1-201ENST00000290378 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
ACTC1-201ENST00000290378 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
ACTC1-201ENST00000290378 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
ACTC1-201ENST00000290378 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
ACTC1-201ENST00000290378 MT4P47944 62 aa3.17□□□□□ -1.9
ACTC1-201ENST00000290378 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
ACTC1-201ENST00000290378 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
ACTC1-201ENST00000290378 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
ACTC1-201ENST00000290378 MT1AP04731 61 aa3.06□□□□□ -1.92
ACTC1-201ENST00000290378 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
ACTC1-201ENST00000290378 KRTAP5-9P26371 169 aa3□□□□□ -1.93
ACTC1-201ENST00000290378 MT3P25713 68 aa2.96□□□□□ -1.94
ACTC1-201ENST00000290378 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
ACTC1-201ENST00000290378 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
ACTC1-201ENST00000290378 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
ACTC1-201ENST00000290378 NEBP20929 6669 aa2.89□□□□□ -1.95
ACTC1-201ENST00000290378 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
ACTC1-201ENST00000290378 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
ACTC1-201ENST00000290378 LCE1DQ5T752 114 aa2.84□□□□□ -1.95
ACTC1-201ENST00000290378 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
ACTC1-201ENST00000290378 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
ACTC1-201ENST00000290378 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
ACTC1-201ENST00000290378 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
ACTC1-201ENST00000290378 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
ACTC1-201ENST00000290378 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
ACTC1-201ENST00000290378 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
ACTC1-201ENST00000290378 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
ACTC1-201ENST00000290378 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
ACTC1-201ENST00000290378 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
ACTC1-201ENST00000290378 LCE1FQ5T754 118 aa2.34□□□□□ -2.04
ACTC1-201ENST00000290378 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
ACTC1-201ENST00000290378 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
ACTC1-201ENST00000290378 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
ACTC1-201ENST00000290378 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
ACTC1-201ENST00000290378 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
ACTC1-201ENST00000290378 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
ACTC1-201ENST00000290378 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
ACTC1-201ENST00000290378 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
ACTC1-201ENST00000290378 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ACTC1-201ENST00000290378 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
ACTC1-201ENST00000290378 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
ACTC1-201ENST00000290378 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
ACTC1-201ENST00000290378 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
ACTC1-201ENST00000290378 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
ACTC1-201ENST00000290378 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
ACTC1-201ENST00000290378 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
ACTC1-201ENST00000290378 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
ACTC1-201ENST00000290378 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
ACTC1-201ENST00000290378 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 98.7 ms