RNA–Protein interactions for RNA: ENST00000289382.7

CNOT11-201, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT11, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-201ENST00000289382 MT1EP04732 61 aa6.32□□□□□ -1.4
CNOT11-201ENST00000289382 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
CNOT11-201ENST00000289382 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
CNOT11-201ENST00000289382 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
CNOT11-201ENST00000289382 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.41
CNOT11-201ENST00000289382 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.41
CNOT11-201ENST00000289382 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
CNOT11-201ENST00000289382 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
CNOT11-201ENST00000289382 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
CNOT11-201ENST00000289382 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
CNOT11-201ENST00000289382 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
CNOT11-201ENST00000289382 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
CNOT11-201ENST00000289382 MT1GP13640 62 aa6.01□□□□□ -1.45
CNOT11-201ENST00000289382 MT1MQ8N339 61 aa5.91□□□□□ -1.46
CNOT11-201ENST00000289382 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
CNOT11-201ENST00000289382 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
CNOT11-201ENST00000289382 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.78□□□□□ -1.48
CNOT11-201ENST00000289382 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
CNOT11-201ENST00000289382 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CNOT11-201ENST00000289382 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
CNOT11-201ENST00000289382 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
CNOT11-201ENST00000289382 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
CNOT11-201ENST00000289382 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
CNOT11-201ENST00000289382 MT1AP04731 61 aa5.48□□□□□ -1.53
CNOT11-201ENST00000289382 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
CNOT11-201ENST00000289382 PRM1P04553 51 aa5.41□□□□□ -1.54
CNOT11-201ENST00000289382 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
CNOT11-201ENST00000289382 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
CNOT11-201ENST00000289382 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
CNOT11-201ENST00000289382 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
CNOT11-201ENST00000289382 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
CNOT11-201ENST00000289382 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
CNOT11-201ENST00000289382 SPRR2EP22531 72 aa5.28□□□□□ -1.56
CNOT11-201ENST00000289382 SPRR2BP35325 72 aa5.28□□□□□ -1.56
CNOT11-201ENST00000289382 SPRR2AP35326 72 aa5.28□□□□□ -1.56
CNOT11-201ENST00000289382 NEBP20929 6669 aa5.28□□□□□ -1.56
CNOT11-201ENST00000289382 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
CNOT11-201ENST00000289382 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
CNOT11-201ENST00000289382 SPRR2DP22532 72 aa5.06□□□□□ -1.6
CNOT11-201ENST00000289382 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
CNOT11-201ENST00000289382 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
CNOT11-201ENST00000289382 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
CNOT11-201ENST00000289382 MT3P25713 68 aa4.69□□□□□ -1.66
CNOT11-201ENST00000289382 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
CNOT11-201ENST00000289382 MT4P47944 62 aa4.62□□□□□ -1.67
CNOT11-201ENST00000289382 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
CNOT11-201ENST00000289382 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
CNOT11-201ENST00000289382 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
CNOT11-201ENST00000289382 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
CNOT11-201ENST00000289382 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
CNOT11-201ENST00000289382 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
CNOT11-201ENST00000289382 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
CNOT11-201ENST00000289382 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
CNOT11-201ENST00000289382 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
CNOT11-201ENST00000289382 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
CNOT11-201ENST00000289382 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CNOT11-201ENST00000289382 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
CNOT11-201ENST00000289382 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
CNOT11-201ENST00000289382 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
CNOT11-201ENST00000289382 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
CNOT11-201ENST00000289382 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
CNOT11-201ENST00000289382 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
CNOT11-201ENST00000289382 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
CNOT11-201ENST00000289382 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
CNOT11-201ENST00000289382 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
CNOT11-201ENST00000289382 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
CNOT11-201ENST00000289382 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CNOT11-201ENST00000289382 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
CNOT11-201ENST00000289382 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
CNOT11-201ENST00000289382 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
CNOT11-201ENST00000289382 KRTAP21-1Q3LI58 79 aa3.43□□□□□ -1.86
CNOT11-201ENST00000289382 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
CNOT11-201ENST00000289382 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CNOT11-201ENST00000289382 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
CNOT11-201ENST00000289382 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
CNOT11-201ENST00000289382 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
CNOT11-201ENST00000289382 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms