RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
CD164-201ENST00000275080 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
CD164-201ENST00000275080 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
CD164-201ENST00000275080 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.86
CD164-201ENST00000275080 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
CD164-201ENST00000275080 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
CD164-201ENST00000275080 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
CD164-201ENST00000275080 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
CD164-201ENST00000275080 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CD164-201ENST00000275080 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
CD164-201ENST00000275080 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
CD164-201ENST00000275080 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
CD164-201ENST00000275080 INE1O15225 51 aa3.24□□□□□ -1.89
CD164-201ENST00000275080 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
CD164-201ENST00000275080 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.89
CD164-201ENST00000275080 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CD164-201ENST00000275080 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
CD164-201ENST00000275080 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
CD164-201ENST00000275080 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
CD164-201ENST00000275080 MT1LQ93083 61 aa3.09□□□□□ -1.91
CD164-201ENST00000275080 MT1GP13640 62 aa3.09□□□□□ -1.91
CD164-201ENST00000275080 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
CD164-201ENST00000275080 MT1EP04732 61 aa3.07□□□□□ -1.92
CD164-201ENST00000275080 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.93
CD164-201ENST00000275080 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
CD164-201ENST00000275080 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
CD164-201ENST00000275080 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
CD164-201ENST00000275080 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
CD164-201ENST00000275080 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
CD164-201ENST00000275080 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
CD164-201ENST00000275080 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
CD164-201ENST00000275080 MT1MQ8N339 61 aa2.88□□□□□ -1.95
CD164-201ENST00000275080 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
CD164-201ENST00000275080 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
CD164-201ENST00000275080 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
CD164-201ENST00000275080 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
CD164-201ENST00000275080 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CD164-201ENST00000275080 PRM1P04553 51 aa2.6□□□□□ -1.99
CD164-201ENST00000275080 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
CD164-201ENST00000275080 SPRR2EP22531 72 aa2.58□□□□□ -2
CD164-201ENST00000275080 SPRR2BP35325 72 aa2.58□□□□□ -2
CD164-201ENST00000275080 SPRR2AP35326 72 aa2.58□□□□□ -2
CD164-201ENST00000275080 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CD164-201ENST00000275080 MT1AP04731 61 aa2.55□□□□□ -2
CD164-201ENST00000275080 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
CD164-201ENST00000275080 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
CD164-201ENST00000275080 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CD164-201ENST00000275080 SPRR2DP22532 72 aa2.43□□□□□ -2.02
CD164-201ENST00000275080 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CD164-201ENST00000275080 MT4P47944 62 aa2.32□□□□□ -2.04
CD164-201ENST00000275080 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
CD164-201ENST00000275080 MT3P25713 68 aa2.31□□□□□ -2.04
CD164-201ENST00000275080 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
CD164-201ENST00000275080 NEBP20929 6669 aa2.23□□□□□ -2.05
CD164-201ENST00000275080 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CD164-201ENST00000275080 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
CD164-201ENST00000275080 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
CD164-201ENST00000275080 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
CD164-201ENST00000275080 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
CD164-201ENST00000275080 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
CD164-201ENST00000275080 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
CD164-201ENST00000275080 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
CD164-201ENST00000275080 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
CD164-201ENST00000275080 LCE1FQ5T754 118 aa2□□□□□ -2.09
CD164-201ENST00000275080 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
CD164-201ENST00000275080 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CD164-201ENST00000275080 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
CD164-201ENST00000275080 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
CD164-201ENST00000275080 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CD164-201ENST00000275080 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
CD164-201ENST00000275080 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
CD164-201ENST00000275080 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
CD164-201ENST00000275080 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CD164-201ENST00000275080 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CD164-201ENST00000275080 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CD164-201ENST00000275080 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
CD164-201ENST00000275080 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 241.3 ms