RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
UBR3-201ENST00000272793 DNHD1Q96M86 4753 aa4.36□□□□□ -1.71
UBR3-201ENST00000272793 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.72
UBR3-201ENST00000272793 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.72
UBR3-201ENST00000272793 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.72
UBR3-201ENST00000272793 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
UBR3-201ENST00000272793 MUC17Q685J3 4493 aa4.21□□□□□ -1.74
UBR3-201ENST00000272793 RYR3Q15413 4870 aa4.2□□□□□ -1.74
UBR3-201ENST00000272793 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
UBR3-201ENST00000272793 MT1AP04731 61 aa4.18□□□□□ -1.74
UBR3-201ENST00000272793 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
UBR3-201ENST00000272793 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
UBR3-201ENST00000272793 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
UBR3-201ENST00000272793 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
UBR3-201ENST00000272793 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
UBR3-201ENST00000272793 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
UBR3-201ENST00000272793 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
UBR3-201ENST00000272793 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
UBR3-201ENST00000272793 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
UBR3-201ENST00000272793 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
UBR3-201ENST00000272793 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
UBR3-201ENST00000272793 HERC2O95714 4834 aa3.93□□□□□ -1.78
UBR3-201ENST00000272793 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
UBR3-201ENST00000272793 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.78
UBR3-201ENST00000272793 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
UBR3-201ENST00000272793 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
UBR3-201ENST00000272793 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
UBR3-201ENST00000272793 HYDINQ4G0P3 5121 aa3.77□□□□□ -1.81
UBR3-201ENST00000272793 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
UBR3-201ENST00000272793 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
UBR3-201ENST00000272793 BIRC6Q9NR09 4857 aa3.64□□□□□ -1.83
UBR3-201ENST00000272793 RYR2Q92736 4967 aa3.63□□□□□ -1.83
UBR3-201ENST00000272793 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
UBR3-201ENST00000272793 KIAA1109Q2LD37 5005 aa3.59□□□□□ -1.83
UBR3-201ENST00000272793 MUC2Q02817 5179 aa3.59□□□□□ -1.84
UBR3-201ENST00000272793 HERC1Q15751 4861 aa3.57□□□□□ -1.84
UBR3-201ENST00000272793 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
UBR3-201ENST00000272793 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
UBR3-201ENST00000272793 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
UBR3-201ENST00000272793 EPPK1P58107 5090 aaKnown RBP3.44□□□□□ -1.86
UBR3-201ENST00000272793 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
UBR3-201ENST00000272793 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.86
UBR3-201ENST00000272793 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
UBR3-201ENST00000272793 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
UBR3-201ENST00000272793 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
UBR3-201ENST00000272793 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
UBR3-201ENST00000272793 KMT2DO14686 5537 aa3.35□□□□□ -1.87
UBR3-201ENST00000272793 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
UBR3-201ENST00000272793 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
UBR3-201ENST00000272793 RNF213Q63HN8 5207 aa3.05□□□□□ -1.92
UBR3-201ENST00000272793 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
UBR3-201ENST00000272793 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
UBR3-201ENST00000272793 USH2AO75445 5202 aa2.92□□□□□ -1.94
UBR3-201ENST00000272793 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
UBR3-201ENST00000272793 NEBP20929 6669 aa2.71□□□□□ -1.98
UBR3-201ENST00000272793 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
UBR3-201ENST00000272793 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
UBR3-201ENST00000272793 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
UBR3-201ENST00000272793 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
UBR3-201ENST00000272793 PHGR1C9JFL3 82 aa2.58□□□□□ -2
UBR3-201ENST00000272793 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
UBR3-201ENST00000272793 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
UBR3-201ENST00000272793 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
UBR3-201ENST00000272793 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
UBR3-201ENST00000272793 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
UBR3-201ENST00000272793 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
UBR3-201ENST00000272793 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
UBR3-201ENST00000272793 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
UBR3-201ENST00000272793 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
UBR3-201ENST00000272793 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
UBR3-201ENST00000272793 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
UBR3-201ENST00000272793 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
UBR3-201ENST00000272793 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
UBR3-201ENST00000272793 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
UBR3-201ENST00000272793 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
UBR3-201ENST00000272793 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
UBR3-201ENST00000272793 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms