RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 EPPK1P58107 5090 aaKnown RBP3.78□□□□□ -1.8
PRDM16-201ENST00000270722 HERC2O95714 4834 aa3.76□□□□□ -1.81
PRDM16-201ENST00000270722 KRTAP17-1Q9BYP8 105 aa3.74□□□□□ -1.81
PRDM16-201ENST00000270722 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
PRDM16-201ENST00000270722 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
PRDM16-201ENST00000270722 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
PRDM16-201ENST00000270722 TNXBP22105 4242 aa3.67□□□□□ -1.82
PRDM16-201ENST00000270722 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
PRDM16-201ENST00000270722 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
PRDM16-201ENST00000270722 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
PRDM16-201ENST00000270722 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
PRDM16-201ENST00000270722 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
PRDM16-201ENST00000270722 HERC1Q15751 4861 aa3.58□□□□□ -1.84
PRDM16-201ENST00000270722 KIAA1109Q2LD37 5005 aa3.57□□□□□ -1.84
PRDM16-201ENST00000270722 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
PRDM16-201ENST00000270722 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
PRDM16-201ENST00000270722 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
PRDM16-201ENST00000270722 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
PRDM16-201ENST00000270722 LRP2P98164 4655 aa3.51□□□□□ -1.85
PRDM16-201ENST00000270722 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
PRDM16-201ENST00000270722 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
PRDM16-201ENST00000270722 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
PRDM16-201ENST00000270722 MUC17Q685J3 4493 aa3.47□□□□□ -1.85
PRDM16-201ENST00000270722 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
PRDM16-201ENST00000270722 HYDINQ4G0P3 5121 aa3.46□□□□□ -1.86
PRDM16-201ENST00000270722 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
PRDM16-201ENST00000270722 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
PRDM16-201ENST00000270722 KMT2CQ8NEZ4 4911 aaKnown RBP3.41□□□□□ -1.86
PRDM16-201ENST00000270722 LPAP08519 4548 aa3.4□□□□□ -1.86
PRDM16-201ENST00000270722 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
PRDM16-201ENST00000270722 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
PRDM16-201ENST00000270722 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
PRDM16-201ENST00000270722 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PRDM16-201ENST00000270722 MUC2Q02817 5179 aa3.22□□□□□ -1.89
PRDM16-201ENST00000270722 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
PRDM16-201ENST00000270722 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
PRDM16-201ENST00000270722 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
PRDM16-201ENST00000270722 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
PRDM16-201ENST00000270722 RNF213Q63HN8 5207 aa3.16□□□□□ -1.9
PRDM16-201ENST00000270722 ABCA13Q86UQ4 5058 aa3.08□□□□□ -1.92
PRDM16-201ENST00000270722 NEBP20929 6669 aa3.02□□□□□ -1.93
PRDM16-201ENST00000270722 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
PRDM16-201ENST00000270722 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
PRDM16-201ENST00000270722 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
PRDM16-201ENST00000270722 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
PRDM16-201ENST00000270722 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
PRDM16-201ENST00000270722 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
PRDM16-201ENST00000270722 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PRDM16-201ENST00000270722 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
PRDM16-201ENST00000270722 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
PRDM16-201ENST00000270722 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
PRDM16-201ENST00000270722 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
PRDM16-201ENST00000270722 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
PRDM16-201ENST00000270722 USH2AO75445 5202 aa2.65□□□□□ -1.99
PRDM16-201ENST00000270722 KMT2DO14686 5537 aa2.61□□□□□ -1.99
PRDM16-201ENST00000270722 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
PRDM16-201ENST00000270722 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
PRDM16-201ENST00000270722 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PRDM16-201ENST00000270722 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
PRDM16-201ENST00000270722 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
PRDM16-201ENST00000270722 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
PRDM16-201ENST00000270722 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
PRDM16-201ENST00000270722 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
PRDM16-201ENST00000270722 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
PRDM16-201ENST00000270722 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
PRDM16-201ENST00000270722 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
PRDM16-201ENST00000270722 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
PRDM16-201ENST00000270722 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
PRDM16-201ENST00000270722 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
PRDM16-201ENST00000270722 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
PRDM16-201ENST00000270722 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
PRDM16-201ENST00000270722 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PRDM16-201ENST00000270722 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
PRDM16-201ENST00000270722 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
PRDM16-201ENST00000270722 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
PRDM16-201ENST00000270722 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
PRDM16-201ENST00000270722 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms