RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 MT1AP04731 61 aa3.09□□□□□ -1.91
CHFR-201ENST00000266880 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
CHFR-201ENST00000266880 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CHFR-201ENST00000266880 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CHFR-201ENST00000266880 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
CHFR-201ENST00000266880 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
CHFR-201ENST00000266880 KIAA1109Q2LD37 5005 aa3□□□□□ -1.93
CHFR-201ENST00000266880 LCE2AQ5TA79 106 aaPredicted RBP3□□□□□ -1.93
CHFR-201ENST00000266880 HERC2O95714 4834 aa2.99□□□□□ -1.93
CHFR-201ENST00000266880 BIRC6Q9NR09 4857 aa2.98□□□□□ -1.93
CHFR-201ENST00000266880 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
CHFR-201ENST00000266880 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
CHFR-201ENST00000266880 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
CHFR-201ENST00000266880 KMT2CQ8NEZ4 4911 aaKnown RBP2.96□□□□□ -1.94
CHFR-201ENST00000266880 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
CHFR-201ENST00000266880 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CHFR-201ENST00000266880 HERC1Q15751 4861 aa2.93□□□□□ -1.94
CHFR-201ENST00000266880 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
CHFR-201ENST00000266880 LRP2P98164 4655 aa2.91□□□□□ -1.94
CHFR-201ENST00000266880 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
CHFR-201ENST00000266880 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
CHFR-201ENST00000266880 LPAP08519 4548 aa2.88□□□□□ -1.95
CHFR-201ENST00000266880 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
CHFR-201ENST00000266880 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
CHFR-201ENST00000266880 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
CHFR-201ENST00000266880 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
CHFR-201ENST00000266880 RNF213Q63HN8 5207 aa2.84□□□□□ -1.96
CHFR-201ENST00000266880 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
CHFR-201ENST00000266880 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
CHFR-201ENST00000266880 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
CHFR-201ENST00000266880 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
CHFR-201ENST00000266880 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
CHFR-201ENST00000266880 HMCN2Q8NDA2 5059 aa2.64□□□□□ -1.99
CHFR-201ENST00000266880 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
CHFR-201ENST00000266880 FAT4Q6V0I7 4981 aa2.54□□□□□ -2
CHFR-201ENST00000266880 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
CHFR-201ENST00000266880 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
CHFR-201ENST00000266880 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2.01
CHFR-201ENST00000266880 MUC2Q02817 5179 aa2.51□□□□□ -2.01
CHFR-201ENST00000266880 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
CHFR-201ENST00000266880 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
CHFR-201ENST00000266880 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
CHFR-201ENST00000266880 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
CHFR-201ENST00000266880 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
CHFR-201ENST00000266880 USH2AO75445 5202 aa2.32□□□□□ -2.04
CHFR-201ENST00000266880 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
CHFR-201ENST00000266880 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
CHFR-201ENST00000266880 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
CHFR-201ENST00000266880 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
CHFR-201ENST00000266880 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
CHFR-201ENST00000266880 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
CHFR-201ENST00000266880 KMT2DO14686 5537 aa2.14□□□□□ -2.07
CHFR-201ENST00000266880 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
CHFR-201ENST00000266880 NEBP20929 6669 aa2.08□□□□□ -2.08
CHFR-201ENST00000266880 FCGBPQ9Y6R7 5405 aaPredicted RBP2.05□□□□□ -2.08
CHFR-201ENST00000266880 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
CHFR-201ENST00000266880 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
CHFR-201ENST00000266880 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
CHFR-201ENST00000266880 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
CHFR-201ENST00000266880 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
CHFR-201ENST00000266880 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CHFR-201ENST00000266880 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
CHFR-201ENST00000266880 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
CHFR-201ENST00000266880 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
CHFR-201ENST00000266880 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
CHFR-201ENST00000266880 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
CHFR-201ENST00000266880 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
CHFR-201ENST00000266880 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CHFR-201ENST00000266880 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CHFR-201ENST00000266880 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
CHFR-201ENST00000266880 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
CHFR-201ENST00000266880 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
CHFR-201ENST00000266880 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
CHFR-201ENST00000266880 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
CHFR-201ENST00000266880 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
CHFR-201ENST00000266880 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
CHFR-201ENST00000266880 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms