RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
PKD1-201ENST00000262304 LPAP08519 4548 aa3.21□□□□□ -1.9
PKD1-201ENST00000262304 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
PKD1-201ENST00000262304 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
PKD1-201ENST00000262304 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
PKD1-201ENST00000262304 MT1LQ93083 61 aa3.17□□□□□ -1.9
PKD1-201ENST00000262304 MT1EP04732 61 aa3.14□□□□□ -1.91
PKD1-201ENST00000262304 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
PKD1-201ENST00000262304 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
PKD1-201ENST00000262304 MT3P25713 68 aa3.08□□□□□ -1.92
PKD1-201ENST00000262304 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
PKD1-201ENST00000262304 MT1MQ8N339 61 aa3.07□□□□□ -1.92
PKD1-201ENST00000262304 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
PKD1-201ENST00000262304 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
PKD1-201ENST00000262304 USH2AO75445 5202 aa3.01□□□□□ -1.93
PKD1-201ENST00000262304 LCE1CQ5T751 118 aa3□□□□□ -1.93
PKD1-201ENST00000262304 LCE1EQ5T753 118 aa3□□□□□ -1.93
PKD1-201ENST00000262304 LCE1FQ5T754 118 aa3□□□□□ -1.93
PKD1-201ENST00000262304 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
PKD1-201ENST00000262304 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
PKD1-201ENST00000262304 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
PKD1-201ENST00000262304 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
PKD1-201ENST00000262304 MUC2Q02817 5179 aa2.94□□□□□ -1.94
PKD1-201ENST00000262304 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PKD1-201ENST00000262304 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
PKD1-201ENST00000262304 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
PKD1-201ENST00000262304 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
PKD1-201ENST00000262304 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
PKD1-201ENST00000262304 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.95
PKD1-201ENST00000262304 MT1AP04731 61 aa2.83□□□□□ -1.96
PKD1-201ENST00000262304 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
PKD1-201ENST00000262304 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
PKD1-201ENST00000262304 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
PKD1-201ENST00000262304 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
PKD1-201ENST00000262304 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
PKD1-201ENST00000262304 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.74□□□□□ -1.97
PKD1-201ENST00000262304 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
PKD1-201ENST00000262304 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
PKD1-201ENST00000262304 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
PKD1-201ENST00000262304 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
PKD1-201ENST00000262304 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
PKD1-201ENST00000262304 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
PKD1-201ENST00000262304 SSPOA2VEC9 5147 aa2.58□□□□□ -2
PKD1-201ENST00000262304 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
PKD1-201ENST00000262304 KMT2DO14686 5537 aa2.5□□□□□ -2.01
PKD1-201ENST00000262304 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
PKD1-201ENST00000262304 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
PKD1-201ENST00000262304 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
PKD1-201ENST00000262304 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
PKD1-201ENST00000262304 NEBP20929 6669 aa2.34□□□□□ -2.04
PKD1-201ENST00000262304 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
PKD1-201ENST00000262304 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
PKD1-201ENST00000262304 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
PKD1-201ENST00000262304 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
PKD1-201ENST00000262304 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
PKD1-201ENST00000262304 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
PKD1-201ENST00000262304 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
PKD1-201ENST00000262304 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
PKD1-201ENST00000262304 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
PKD1-201ENST00000262304 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
PKD1-201ENST00000262304 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
PKD1-201ENST00000262304 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
PKD1-201ENST00000262304 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
PKD1-201ENST00000262304 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
PKD1-201ENST00000262304 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
PKD1-201ENST00000262304 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PKD1-201ENST00000262304 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
PKD1-201ENST00000262304 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
PKD1-201ENST00000262304 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
PKD1-201ENST00000262304 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
PKD1-201ENST00000262304 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
PKD1-201ENST00000262304 KRTAP5-1Q6L8H4 278 aa1.4□□□□□ -2.19
PKD1-201ENST00000262304 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
PKD1-201ENST00000262304 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
PKD1-201ENST00000262304 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
PKD1-201ENST00000262304 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
PKD1-201ENST00000262304 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 79.2 ms