RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
GYPC-201ENST00000259254 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
GYPC-201ENST00000259254 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
GYPC-201ENST00000259254 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
GYPC-201ENST00000259254 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
GYPC-201ENST00000259254 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
GYPC-201ENST00000259254 MT1EP04732 61 aa5.73□□□□□ -1.49
GYPC-201ENST00000259254 SPRR2DP22532 72 aa5.72□□□□□ -1.49
GYPC-201ENST00000259254 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
GYPC-201ENST00000259254 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
GYPC-201ENST00000259254 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
GYPC-201ENST00000259254 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
GYPC-201ENST00000259254 MT1LQ93083 61 aa5.57□□□□□ -1.52
GYPC-201ENST00000259254 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
GYPC-201ENST00000259254 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
GYPC-201ENST00000259254 MT1GP13640 62 aa5.48□□□□□ -1.53
GYPC-201ENST00000259254 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
GYPC-201ENST00000259254 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
GYPC-201ENST00000259254 MT1MQ8N339 61 aa5.41□□□□□ -1.54
GYPC-201ENST00000259254 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
GYPC-201ENST00000259254 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
GYPC-201ENST00000259254 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
GYPC-201ENST00000259254 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
GYPC-201ENST00000259254 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
GYPC-201ENST00000259254 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
GYPC-201ENST00000259254 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
GYPC-201ENST00000259254 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
GYPC-201ENST00000259254 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
GYPC-201ENST00000259254 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
GYPC-201ENST00000259254 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
GYPC-201ENST00000259254 MT4P47944 62 aa5□□□□□ -1.61
GYPC-201ENST00000259254 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
GYPC-201ENST00000259254 H3BS24 57 aa4.96□□□□□ -1.62
GYPC-201ENST00000259254 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
GYPC-201ENST00000259254 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
GYPC-201ENST00000259254 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
GYPC-201ENST00000259254 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
GYPC-201ENST00000259254 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
GYPC-201ENST00000259254 MT1AP04731 61 aa4.75□□□□□ -1.65
GYPC-201ENST00000259254 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
GYPC-201ENST00000259254 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
GYPC-201ENST00000259254 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
GYPC-201ENST00000259254 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
GYPC-201ENST00000259254 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
GYPC-201ENST00000259254 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
GYPC-201ENST00000259254 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
GYPC-201ENST00000259254 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
GYPC-201ENST00000259254 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
GYPC-201ENST00000259254 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
GYPC-201ENST00000259254 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
GYPC-201ENST00000259254 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
GYPC-201ENST00000259254 MT3P25713 68 aa4.33□□□□□ -1.72
GYPC-201ENST00000259254 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
GYPC-201ENST00000259254 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
GYPC-201ENST00000259254 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
GYPC-201ENST00000259254 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
GYPC-201ENST00000259254 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
GYPC-201ENST00000259254 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
GYPC-201ENST00000259254 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
GYPC-201ENST00000259254 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
GYPC-201ENST00000259254 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
GYPC-201ENST00000259254 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
GYPC-201ENST00000259254 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
GYPC-201ENST00000259254 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
GYPC-201ENST00000259254 INE1O15225 51 aa3.66□□□□□ -1.82
GYPC-201ENST00000259254 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
GYPC-201ENST00000259254 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
GYPC-201ENST00000259254 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
GYPC-201ENST00000259254 PRM1P04553 51 aa3.23□□□□□ -1.89
GYPC-201ENST00000259254 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
GYPC-201ENST00000259254 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
GYPC-201ENST00000259254 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
GYPC-201ENST00000259254 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
GYPC-201ENST00000259254 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
GYPC-201ENST00000259254 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
GYPC-201ENST00000259254 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
GYPC-201ENST00000259254 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 85.8 ms