RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
CAB39-201ENST00000258418 MT1LQ93083 61 aa5□□□□□ -1.61
CAB39-201ENST00000258418 SSPOA2VEC9 5147 aa5□□□□□ -1.61
CAB39-201ENST00000258418 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
CAB39-201ENST00000258418 MT1EP04732 61 aa4.98□□□□□ -1.61
CAB39-201ENST00000258418 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
CAB39-201ENST00000258418 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
CAB39-201ENST00000258418 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
CAB39-201ENST00000258418 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
CAB39-201ENST00000258418 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CAB39-201ENST00000258418 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
CAB39-201ENST00000258418 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
CAB39-201ENST00000258418 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
CAB39-201ENST00000258418 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
CAB39-201ENST00000258418 SPRR2EP22531 72 aa4.62□□□□□ -1.67
CAB39-201ENST00000258418 SPRR2BP35325 72 aa4.62□□□□□ -1.67
CAB39-201ENST00000258418 SPRR2AP35326 72 aa4.62□□□□□ -1.67
CAB39-201ENST00000258418 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
CAB39-201ENST00000258418 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
CAB39-201ENST00000258418 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
CAB39-201ENST00000258418 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
CAB39-201ENST00000258418 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
CAB39-201ENST00000258418 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
CAB39-201ENST00000258418 SPRR2DP22532 72 aa4.4□□□□□ -1.71
CAB39-201ENST00000258418 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
CAB39-201ENST00000258418 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
CAB39-201ENST00000258418 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
CAB39-201ENST00000258418 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
CAB39-201ENST00000258418 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
CAB39-201ENST00000258418 MT1AP04731 61 aa4.18□□□□□ -1.74
CAB39-201ENST00000258418 PRM1P04553 51 aa4.16□□□□□ -1.74
CAB39-201ENST00000258418 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
CAB39-201ENST00000258418 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
CAB39-201ENST00000258418 MT4P47944 62 aa4.12□□□□□ -1.75
CAB39-201ENST00000258418 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
CAB39-201ENST00000258418 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
CAB39-201ENST00000258418 MT3P25713 68 aa3.99□□□□□ -1.77
CAB39-201ENST00000258418 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
CAB39-201ENST00000258418 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
CAB39-201ENST00000258418 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
CAB39-201ENST00000258418 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
CAB39-201ENST00000258418 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
CAB39-201ENST00000258418 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
CAB39-201ENST00000258418 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
CAB39-201ENST00000258418 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CAB39-201ENST00000258418 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CAB39-201ENST00000258418 NEBP20929 6669 aa3.65□□□□□ -1.82
CAB39-201ENST00000258418 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
CAB39-201ENST00000258418 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CAB39-201ENST00000258418 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
CAB39-201ENST00000258418 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
CAB39-201ENST00000258418 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
CAB39-201ENST00000258418 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
CAB39-201ENST00000258418 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
CAB39-201ENST00000258418 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
CAB39-201ENST00000258418 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CAB39-201ENST00000258418 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
CAB39-201ENST00000258418 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
CAB39-201ENST00000258418 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
CAB39-201ENST00000258418 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
CAB39-201ENST00000258418 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
CAB39-201ENST00000258418 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
CAB39-201ENST00000258418 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
CAB39-201ENST00000258418 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
CAB39-201ENST00000258418 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
CAB39-201ENST00000258418 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
CAB39-201ENST00000258418 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
CAB39-201ENST00000258418 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
CAB39-201ENST00000258418 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
CAB39-201ENST00000258418 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
CAB39-201ENST00000258418 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CAB39-201ENST00000258418 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
CAB39-201ENST00000258418 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CAB39-201ENST00000258418 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
CAB39-201ENST00000258418 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
CAB39-201ENST00000258418 PHGR1C9JFL3 82 aa2□□□□□ -2.09
CAB39-201ENST00000258418 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 98.6 ms