RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 MT1MQ8N339 61 aa3.41□□□□□ -1.86
PUM1-201ENST00000257075 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.86
PUM1-201ENST00000257075 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
PUM1-201ENST00000257075 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
PUM1-201ENST00000257075 MT3P25713 68 aa3.4□□□□□ -1.87
PUM1-201ENST00000257075 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
PUM1-201ENST00000257075 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
PUM1-201ENST00000257075 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
PUM1-201ENST00000257075 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.88
PUM1-201ENST00000257075 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
PUM1-201ENST00000257075 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
PUM1-201ENST00000257075 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
PUM1-201ENST00000257075 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
PUM1-201ENST00000257075 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
PUM1-201ENST00000257075 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
PUM1-201ENST00000257075 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
PUM1-201ENST00000257075 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
PUM1-201ENST00000257075 MUC2Q02817 5179 aa3.25□□□□□ -1.89
PUM1-201ENST00000257075 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
PUM1-201ENST00000257075 TNXBP22105 4242 aa3.23□□□□□ -1.89
PUM1-201ENST00000257075 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
PUM1-201ENST00000257075 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
PUM1-201ENST00000257075 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
PUM1-201ENST00000257075 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
PUM1-201ENST00000257075 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
PUM1-201ENST00000257075 MT1AP04731 61 aa3.16□□□□□ -1.9
PUM1-201ENST00000257075 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
PUM1-201ENST00000257075 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
PUM1-201ENST00000257075 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
PUM1-201ENST00000257075 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
PUM1-201ENST00000257075 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
PUM1-201ENST00000257075 PRM1P04553 51 aa2.98□□□□□ -1.93
PUM1-201ENST00000257075 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
PUM1-201ENST00000257075 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
PUM1-201ENST00000257075 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.94
PUM1-201ENST00000257075 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
PUM1-201ENST00000257075 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
PUM1-201ENST00000257075 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
PUM1-201ENST00000257075 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
PUM1-201ENST00000257075 USH2AO75445 5202 aa2.81□□□□□ -1.96
PUM1-201ENST00000257075 NEBP20929 6669 aa2.8□□□□□ -1.96
PUM1-201ENST00000257075 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
PUM1-201ENST00000257075 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
PUM1-201ENST00000257075 KMT2DO14686 5537 aa2.77□□□□□ -1.97
PUM1-201ENST00000257075 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
PUM1-201ENST00000257075 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
PUM1-201ENST00000257075 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
PUM1-201ENST00000257075 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
PUM1-201ENST00000257075 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
PUM1-201ENST00000257075 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
PUM1-201ENST00000257075 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
PUM1-201ENST00000257075 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
PUM1-201ENST00000257075 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PUM1-201ENST00000257075 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.02
PUM1-201ENST00000257075 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
PUM1-201ENST00000257075 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
PUM1-201ENST00000257075 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
PUM1-201ENST00000257075 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
PUM1-201ENST00000257075 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
PUM1-201ENST00000257075 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
PUM1-201ENST00000257075 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
PUM1-201ENST00000257075 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
PUM1-201ENST00000257075 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.08
PUM1-201ENST00000257075 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
PUM1-201ENST00000257075 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
PUM1-201ENST00000257075 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
PUM1-201ENST00000257075 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
PUM1-201ENST00000257075 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
PUM1-201ENST00000257075 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
PUM1-201ENST00000257075 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
PUM1-201ENST00000257075 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
PUM1-201ENST00000257075 KRTAP5-1Q6L8H4 278 aa1.58□□□□□ -2.16
PUM1-201ENST00000257075 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
PUM1-201ENST00000257075 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
PUM1-201ENST00000257075 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
PUM1-201ENST00000257075 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
PUM1-201ENST00000257075 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms